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  • RIDER Lung CT Segmentation Labels from: Decoding tumour phenotype by noninvasive imaging using a quantitative radiomics approach (RIDER-LungCT-Seg)

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Summary


Excerpt

This dataset contains images from 31 out of the 32 non-small cell lung cancer (NSCLC) patients in the RIDER Lung CT collection on TCIA. For these subjects a radiation oncologist was blinded to the all delineations of the 3D volume of the gross tumor volume. They were then asked to manually delineate the gross tumour volume in both the test image and the re-test image. The process was repeated using an in-house autosegmentation method. There is no clinical outcome data associated with this dataset.

This dataset refers to the RIDER dataset of the study published in Nature Communications (http://doi.org/10.1038/ncomms5006). In short, this publication used the dataset to select for repeatable radiomics features in a test-retest context. Radiomics refers to the comprehensive quantification of tumour phenotypes by applying a large number of quantitative image features. In the published analysis, 440 features quantifying tumour image intensity, shape and texture, were extracted. We found that a large number of radiomic features have prognostic power in independent data sets, many of which were not identified as significant before. Radiogenomics analysis revealed that a prognostic radiomic signature, capturing intra-tumour heterogeneity, was associated with underlying gene-expression patterns. These data suggest that radiomics identifies a general prognostic phenotype existing in both lung and head-and-neck cancer. This may have a clinical impact as imaging is routinely used in clinical practice, providing an unprecedented opportunity to improve decision-support in cancer treatment at low cost.

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Other data sets in the Cancer Imaging Archive that were used in the same study published in Nature Communications: NSCLCNSCLC-Radiomics, NSCLC-Radiomics-GenomicsNSCLC-Radiomics-Interobserver1HeadHEAD-NeckNECK-RadiomicsRADIOMICS-HN1.  


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Localtab
activetrue
titleData Access

Data Access

Click the Download button to save a ".tcia" manifest file to your computer, which you must open with the NBIA Data Retriever.

Data TypeDownload all or Query/FilterLicense
Gross Tumor Volume Segmentation - (DICOM RTSTRUCT and SEG,  912 MB)


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urlhttps://wiki.cancerimagingarchive.net/download/attachments/46334165/RIDER%20Lung%20CT%20RTSTRUCTS%20DICOM%20SEGS%20Leonard%20Wee%20Feb%2010%202020.tcia?api=v2


(Requires NBIA Data Retriever.)

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Collections Used in this Third Party Analysis

Below is a list of the Collections used in these analyses:

Source Data TypeDownload all or Query/Filter

License

Image Removed

Corresponding Original CT Images from RIDER Lung CT - (DICOM, 7 GB)


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urlhttps://wiki.cancerimagingarchive.net/download/attachments/46334165/RIDER%20Lung%20CT%20Original%20Scans%20for%20Leonard%20Wee%20Feb%2010%202020%20.tcia?api=v2


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Localtab
titleDetailed Description

Detailed Description

Image Statistics


Modalities (DICOM)

RTSTRUCT, SEG

Number of Patients

31

Number of Studies

31

Number of Series

118

Number of Images

118

Images Size (GB)912 MB
  • (RIDER-2283289298) only has segmentations associated with the retest.

  • (RIDER-5195703382) only has segmentations associated with the test.

  • (RIDER-8509201188) only has segmentations associated with the test.

  • (RIDER-9762593735) not included in the data set due to missing delineations.


Localtab
titleCitations & Data Usage Policy

Citations & Data Usage Policy 

This analysis set may not be used for commercial purposes. It is available to browse, download, as outlined in the Attribution-NonCommercial 3.0 Unported (CC BY-NC 3.0https://creativecommons.org/licenses/by-nc/3.0/.  See TCIA's Data Usage Policies and Restrictions for additional details. Questions may be directed to help@cancerimagingarchive.net.

Tcia limited license policy

Info
titleData Citation

Leonard Wee, Hugo L., Aerts, Petros Kalendralis and Andre Dekker. (2018) H., Kalendralis, P., & Dekker, A. (2020). RIDER Lung CT Segmentation Labels from: Decoding tumour phenotype by noninvasive imaging using a quantitative radiomics approach [Data set]. The Cancer Imaging Archive.   https://doi.org/10.7937/tcia.2020.jit9grk8


Info
titleTCIA Citation

Clark, K., Vendt, B., Smith, K., Freymann, J., Kirby, J., Koppel, P., Moore, S., Phillips, S., Maffitt, D., Pringle, M., Tarbox, L., & Prior, F.  The (2013). The Cancer Imaging Archive (TCIA): Maintaining and Operating a Public Information Repository, . Journal of Digital Imaging, Volume 26, Number (6, December, 2013, pp 1045-1057. (paper)), 1045–1057. https://doi.org/10.1007/s10278-013-9622-7


Info
titlePublication Citation

Aerts, H. J. W. L., Velazquez, E. R., Leijenaar, R. T. H., Parmar, C., Grossmann, P., CavalhoCarvalho, S., … , Bussink, J., Monshouwer, R., Haibe-Kains, B., Rietveld, D., Hoebers, F., Rietbergen, M. M., Leemans, C. R., Dekker, A., Quackenbush, J., Gillies, R. J., & Lambin, P. (2014, June 3). Decoding tumour phenotype by noninvasive imaging using a quantitative radiomics approach. Nature Communications. Nature Publishing Group. http, 5(1). https://doi.org/10.1038/ncomms5006

Questions may be directed to help@cancerimagingarchive.net.

Other Publications Using This Data

TCIA maintains a list of publications that leverage TCIA data. If you have a manuscript you'd like to add please contact the TCIA Helpdesk.


Localtab
titleVersions

Version

1 (Current)

2 (Current): Updated 2021/10/28

Data TypeDownload all or Query/Filter
Gross Tumor Volume Segmentation - (DICOM RTSTRUCT and SEG,  912 MB)
Corresponding Original CT Images from RIDER Lung CT - (DICOM, 7 GB)

The authors of this dataset agreed to change the license to permit commercial use.  The actual dataset remains unchanged.

Version 1: Updated 2020/02/13

Data TypeDownload all or Query/Filter
Gross Tumor Volume Segmentation - (DICOM RTSTRUCT and SEG,  912 MB)
Corresponding Original CT Images from RIDER Lung CT - (DICOM, 7 GB)