...
The Data Integration & Imaging Informatics (DI-Cubed) project explored the issue of lack of standardized data capture at the point of data creation, as reflected in the non-image data accompanying various 4 TCIA breast cancer collections (ISPY1, BREAST-DIAGNOSIS, Breast-MRI-NACT-Pilot, TCGA-BRCA) and the Ivy Glioblastoma Atlas Project (Ivy GAP) brain cancer collection. The work addressed the desire for semantic interoperability between various NCI initiatives by aligning on common clinical metadata elements and supporting use cases that connect clinical, imaging, and genomics data. Accordingly, clinical and measurement data imported into I2B2 were cross-mapped to industry standard concepts for names and values including those derived from BRIDG, CDISC SDTM, DICOM Structured Reporting models and using NCI Thesaurus, SNOMED CT and LOINC controlled terminology.
...
| Localtab Group |
|---|
| Localtab |
|---|
| active | true |
|---|
| title | Data Access |
|---|
| Data AccessClick the Download button to save a ".tcia" manifest file to your computer, which you must open with the NBIA Data Retriever
| Data Type | Download all or Query/Filter |
|---|
| Images from ISPY1 (DICOM) | | | Images from Breast-MRI-NACT-Pilot (DICOM) | | Images from Ivy-GAP (DICOM) |  Image Removed |
|---|
| SAS Transport Files (XPT) | | | Image Analysis (CSV) | |
Note: Please contact help@cancerimagingarchive.net with any questions regarding usage. |
| Localtab |
|---|
| title | Detailed Description |
|---|
| Detailed DescriptionTCIA breast cancer collections used: TCIA brain cancer collection used: |
| Localtab |
|---|
| title | Citations & Data Usage Policy |
|---|
| Citations & Data Usage Policy These collections are freely available to browse, download, and use for commercial, scientific and educational purposes as outlined in the Creative Commons Attribution 3.0 Unported License. Questions may be directed to help@cancerimagingarchive.net. Please be sure to acknowledge both this data set and TCIA in publications by including the following citations in your work: | Info |
|---|
| Hickman H., Ver Hoef W., Hastak S., Neville J., Clunie D., Wagner U., Helton E. (2019). SDTM datasets of clinical data and measurements for selected cancer collections to TCIA [Dataset]. The Cancer Imaging Archive. doi: 10.7937/TCIA.2019.zfv154m9 |
| Info |
|---|
| Clark K, Vendt B, Smith K, Freymann J, Kirby J, Koppel P, Moore S, Phillips S, Maffitt D, Pringle M, Tarbox L, Prior F. The Cancer Imaging Archive (TCIA): Maintaining and Operating a Public Information Repository, Journal of Digital Imaging, Volume 26, Number 6, December, 2013, pp 1045-1057. (paper) |
Other Publications Using This DataTCIA maintains a list of publications that leverage TCIA data. If you have a manuscript you'd like to add please contact the TCIA Helpdesk. |
| Localtab |
|---|
| Version 1 (Current): 2019/0806/1921| Data Type | Download all or Query/Filter |
|---|
| Images from ISPY1 (DICOM) | | | Images from Breast-MRI-NACT-Pilot (DICOM) | | Images from Ivy-GAP (DICOM) | Image Removed |
|---|
| SAS Transport Files (XPT) | | | Image Analysis (CSV) | |
|
|
