The Cancer Imaging Archive (TCIA) Public Access

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  • HER2 and trastuzumab treatment response H&E slides with tumor ROI annotations (HER2 tumor ROIs)

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changes.mady.by.user Justin Kirby

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changes.mady.by.user Kirk Smith

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Localtab Group


Localtab
activetrue
titleData Access

Data Access

Data TypeDownload all or Query/FilterLicense
Tissue Slide Images (SVS,40GB)


Tcia button generator
urlhttps://faspex.cancerimagingarchive.net/aspera/faspex/external_deliveries/278?passcode=4ee5d71f5adb4f116b72e3cab18abc6c4a037e5b


(Download requires Aspera)

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Clinical data (CSV)

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Click the Versions tab for more info about data releases.

Please contact help@cancerimagingarchive.net  with any questions regarding usage.


Localtab
titleDetailed Description

Detailed Description

Image Statistics


Modalities

Pathology

Number of Patients

273

Number of Images

273

Images Size (GB)40




Localtab
titleCitations & Data Usage Policy

Citations & Data Usage Policy

tcia-limited-license-4-internationalpolicy

Info
titleData Citation

Farahmand, Saman, Fernandez, Aileen I, Ahmed, Fahad Shabbir, Rimm, David L., Chuang, Jeffrey H., Reisenbichler, Emily, & Zarringhalam, Kourosh. (2022). HER2 and trastuzumab treatment response H&E slides with tumor ROI annotations (Version 1) [Data set]. The Cancer Imaging Archive. https://doi.org/10.7937/E65C-AM96


Info
titlePublication Citation

Farahmand, S., Fernandez, A.I., Ahmed, F.S. et al. Deep learning trained on hematoxylin and eosin tumor region of Interest predicts HER2 status and trastuzumab treatment response in HER2+ breast cancer. Mod Pathol (2021). https://doi.org/10.1038/s41379-021-00911-w


Info
titleTCIA Citation

Clark K, Vendt B, Smith K, Freymann J, Kirby J, Koppel P, Moore S, Phillips S, Maffitt D, Pringle M, Tarbox L, Prior F. The Cancer Imaging Archive (TCIA): Maintaining and Operating a Public Information Repository, Journal of Digital Imaging, Volume 26, Number 6, December, 2013, pp 1045-1057. DOI: 10.1007/s10278-013-9622-7

Other Publications Using This Data

TCIA maintains a list of publications which leverage TCIA data. If you have a manuscript you'd like to add please contact the TCIA Helpdesk.


Localtab
titleVersions

Version 1 (Current): Updated 2022/03/25

Data TypeDownload all or Query/Filter
Images (SVS, 40GB)


Tcia button generator
urlhttps://faspex.cancerimagingarchive.net/aspera/faspex/external_deliveries/278?passcode=4ee5d71f5adb4f116b72e3cab18abc6c4a037e5b



(Download requires Aspera)

Clinical Data (CSV)



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