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These are the 3D image data used in the simulations of the paper "The Role of Image Compression Standards in Medical Imaging: Current Status and Future Trends". 10 series per collection were selected from CT COLONOGRAPHY (ACRIN 6664), Data from The Lung Image Database Consortium (LIDC) and Image Database Resource Initiative (IDRI): A completed reference database of lung nodules on CT scans (LIDC-IDRI), The Cancer Genome Atlas Breast Invasive Carcinoma Collection (TCGA-BRCA), and The Cancer Genome Atlas Glioblastoma Multiforme Collection (TCGA-GBM) for analysis. Lossless and lossy compression algorithms, including JPEG, JPEG-LS, JPEG-XR, JPEG2000, HEVC, are used to compress and decompress the images. Their performances are compared in the paper.
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| title | Data Access |
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| Data Access Click the Download button to save a ".tcia" manifest file to your computer, which you must open with the NBIA Data Retriever
| LIDC images (DICOM) | | | Data Type | Download all or Query/Filter | License |
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| Subset of CT COLONOGRAPHY Images (DICOM) |
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| url | https://wiki.cancerimagingarchive.net/download/attachments/22518423/doiJNLP_TCGA-COLONOGRAPHY_Data.tcia?api=v2 |
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| Download CT COLONOGRAPHY subset |
(Download requires the NBIA Data Retriever) | | | Subset of LIDC-IDRI images (DICOM) |
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| url | https://wiki.cancerimagingarchive.net/download/attachments/22518423/doiJNLP_LIDC-IDRI_Data.tcia?api=v2 |
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| Download LIDC-IDRI subset |
(Download requires the NBIA Data Retriever) | | | Subset of |
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| url | https://wiki.cancerimagingarchive.net/download/attachments/22518423/doiJNLP_TCGA-BRCA_Data.tcia?api=v2 |
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| Download TCGA-BRCA subset |
(Download requires the NBIA Data Retriever) | | | Subset of TCGA-GBM images (DICOM) |
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| url | https://wiki.cancerimagingarchive.net/download/attachments/22518423/doiJNLP_TCGA-GBM_Data.tcia?api=v2 |
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| Limited access TCGA-GBM subset |
(Download requires the NBIA Data Retriever) |
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Please contact help@cancerimagingarchive.net with any questions regarding usage. |
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| title | Detailed Description |
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| Detailed DescriptionThis Collection used subsets of existing TCIA data. | Collection Statistics | Radiology |
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| Modalities | MR,CT | | Number of Participants | 37 | | Number of Studies | 40 | | Number of Series | 40 | | Number of Images | 9,252 | | Image Size (GB) | 3.9 |
manifest (note includes limited-access data): metadata.csv |
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| title | Citations & Data Usage Policy |
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| Citations & Data Usage Policy public-collection-licenseThese collections are freely available to browse, download, and use for commercial, scientific and educational purposes as outlined in the Creative Commons Attribution 3.0 Unported License. Questions may be directed to help@cancerimagingarchive.net. Please be sure to acknowledge both this data set and TCIA in publications by including the following citations in your work: | Info |
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| Liu, Feng; Hernandez-Cabronero, Miguel; Sanchez, Victor; Marcellin, Michael W.; Bilgin, Ali. (2016). Image Data Used in the Simulations of "The Role of Image Compression Standards in Medical Imaging: Current Status and Future Trends". The Cancer Imaging Archive. https://doi.org/10.7937/K9/TCIA.2016.xHsOkCdc
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| Info |
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| title | Publication Citation |
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| Liu, Feng; Hernandez-Cabronero, Miguel; Sanchez, Victor; Marcellin, Michael W.; Bilgin, Ali. (2017) The Current Role of Image Compression Standards in Medical Imaging. Information 8(4):131-157. doi:10.3390/info8040131 http://www.mdpi.com/2078-2489/8/4/131
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| Info |
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| Clark K, Vendt B, Smith K, Freymann J, Kirby J, Koppel P, Moore S, Phillips S, Maffitt D, Pringle M, Tarbox L, Prior F. The Cancer Imaging Archive (TCIA): Maintaining and Operating a Public Information Repository, Journal of Digital Imaging, Volume 26, Number 6, December, 2013, pp 1045-1057. DOI: https://doi.org/10.1007/s10278-013-9622-7 |
In addition to the dataset citation above, please be sure to cite the following if you utilize these data in your research: info | | title | Publication Citation |
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| Liu, Feng; Hernandez-Cabronero, Miguel; Sanchez, Victor; Marcellin, Michael W.; Bilgin, Ali. (2017) The Current Role of Image Compression Standards in Medical Imaging . Information 8(4):131-157. doi:10.3390/info8040131 http://www.mdpi.com/2078-2489/8/4/131
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Other Publications Using This DataTCIA maintains a list of publications that leverage TCIA data. If you have a manuscript you'd like to add please contact the TCIA Helpdesk. |
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| Version 1 (Current): 2016/12/08| Data Type | Download all or Query/Filter | License |
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| CT Images (DICOM)) |
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| url | https://wiki.cancerimagingarchive.net/download/attachments/22518423/doiJNLP_TCGA-COLONOGRAPHY_Data.tcia?api=v2 |
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| Download CT COLONOGRAPHY subset |
(Download requires the NBIA Data Retriever) | | | LIDC images (DICOM)) |
| Tcia button generator |
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| url | https://wiki.cancerimagingarchive.net/download/attachments/22518423/doiJNLP_LIDC-IDRI_Data.tcia?api=v2 |
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| Download LIDC-IDRI subset |
(Download requires the NBIA Data Retriever) | | | TCGA-BRCA images (DICOM) | Image Removed
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| url | https://wiki.cancerimagingarchive.net/download/attachments/22518423/doiJNLP_TCGA-BRCA_Data.tcia?api=v2 |
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| Download TCGA-BRCA subset |
(Download requires the NBIA Data Retriever) | | | TCGA-GBM images (DICOM) | Image Removed
| Tcia button generator |
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| url | https://wiki.cancerimagingarchive.net/download/attachments/22518423/doiJNLP_TCGA-GBM_Data.tcia?api=v2 |
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| Limited access TCGA-GBM subset |
(Download requires the NBIA Data Retriever) |
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