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  • Radiomic Biomarkers in Oropharyngeal Carcinoma (OPC-Radiomics)

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  • Jennifer Yin Yee Kwan MD, Jie Su MSc, Shao Hui Huang MSc MRT(T) MD, Laleh S. Ghoraie PhD, Wei Xu PhD, Biu Chan, Kenneth W. Yip PhD, Meredith Giuliani MBBS MEd FRCPC, Andrew Bayley MD FRCPC, John Kim MD FRCPC, Andrew J. Hope MD FRCPC, Jolie Ringash MD MSc FRCPC, John Cho MD PhD FRCPC, Andrea McNiven PhD MCCPM, Aaron Hansen MBBS FRACP, David Goldstein MD FRCSC, John de Almeida MD MSc FRCSC, Hugo J. Aerts PhD, John N. Waldron MD MSc FRCPC, Benjamin Haibe-Kains PhD, Brian O’Sullivan MB BCh BAO FRCPC, Scott V. Bratman MD PhD FRCPC, Fei-Fei Liu MD FRCPC, Farnoosh Khodakarami, PhD, Katrina Rey-McIntyre, BSc, CCRP.

For scientific or other inquiries about this dataset, 

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please contact the TCIA Helpdesk.


Localtab Group



Localtab
activetrue
titleData Access

Data Access

  Choosing the Download option will provide you with a file to launch the TCIA Download Manager to download the entire collection. If you want to browse or filter the data to select only specific scans/studies please use the Search option.


Data TypeDownload all or Query/Filter
Images and Radiation Therapy Structures (DICOM, 61.75 GB)

 

Clinical (e.g. patient demographics, outcomes)


Click the Versions tab for more info about data releases.




Localtab
titleDetailed Description

Detailed Description


Collection Statistics


Modalities

CT, RTSTRUCT

Number of Participants

606

Number of Studies

606

Number of Series

1220

Number of Images

108,813

Image Size (GB)61.75


Supporting Documentation

  • 300 patients in this dataset are also a subset of 542 patients from Princess Margaret Cancer Centre published in 2015: External validation of a prognostic CT-based radiomic signature in oropharyngeal squamous cell carcinoma. PMID:  26264429  DOI:  10.3109/0284186X.2015.1061214 . You can download just this portion of the Collection using this link:     
                   
                    OPC-Radiomics-300.tcia 30.9 GB

    to save a ".tcia" manifest file to your computer, which you must open with the  NBIA Data Retriever . Click the  Search  button to open our Data Portal, where you can browse the data collection and/or download a subset of its contents. 




Localtab
titleCitations & Data Usage Policy

Citations & Data Usage Policy 

Public collection license

Info
titleData Citation

Kwan JYY, Su J, Huang SH, Ghoraie LS, Xu W, Chan B, Yip KW, Giuliani M, Bayley A, Kim J, Hope AJ, Ringash J, Cho J, McNiven A, Hansen A, Goldstein D, de Almeida JR, Aerts HJ, Waldron JN, Haibe-Kains B, O'Sullivan B, Bratman SV, Liu FF. (2019). Data from Radiomic Biomarkers to Refine Risk Models for Distant Metastasis in Oropharyngeal Carcinoma. The Cancer Imaging Archive. DOI:  10.7937/tcia.2019.8dho2gls




Info
titlePublication Citation

Kwan JYY, Su J, Huang SH, Ghoraie LS, Xu W, Chan B, Yip KW, Giuliani M, Bayley A, Kim J, Hope AJ, Ringash J, Cho J, McNiven A, Hansen A, Goldstein D, de Almeida JR, Aerts HJ, Waldron JN, Haibe-Kains B, O'Sullivan B, Bratman SV, Liu FF.  (2018)  Radiomic Biomarkers to Refine Risk Models for Distant Metastasis in HPV-related Oropharyngeal Carcinoma . International Journal of Radiation Oncology*Biology*Physics, 1-10. DOI: 10.1016/j.ijrobp.2018.01.057
ScienceDirect link




Info
titleTCIA Citation

Clark K, Vendt B, Smith K, Freymann J, Kirby J, Koppel P, Moore S, Phillips S, Maffitt D, Pringle M, Tarbox L, Prior F. The Cancer Imaging Archive (TCIA): Maintaining and Operating a Public Information Repository, Journal of Digital Imaging, Volume 26, Number 6, December, 2013, pp 1045-1057.  DOI: 10.1007/s10278-013-9622-7


Other Publications Using This Data

TCIA maintains a list of publications which leverage our data. If you have a publication you'd like to add please contact the TCIA Helpdesk. At this time the following related publication has been brought to TCIA's attention:

  1. Leijenaar RT, Carvalho S, Hoebers FJ, Aerts HJ, van Elmpt WJ, Huang SH, Chan B, Waldron JN, O'sullivan B, Lambin P. (2015) External validation of a prognostic CT-based radiomic signature in oropharyngeal squamous cell carcinoma. Acta Oncol. 54(9):1423-9. DOI:  10.3109/0284186X.2015.1061214





Localtab
titleVersions

Version 1 (Current): Updated 2020/01/29


Data TypeDownload all or Query/Filter
Images (DICOM,  61.6 GB)

 

Summary clinical data






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