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  • DICOM SR of clinical data and measurement for breast cancer collections to TCIA (DICOM-SR-Breast-Clinical)

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SR for Single site breast DCE-MRI data and segmentations from patients undergoing neoadjuvant chemotherapy (
Localtab Group



SR for The Cancer Genome Atlas Breast Invasive Carcinoma Collection (TCGA-BRCA)
Localtab
activetrue
titleData Access

Data Access

Please see the Detailed Description tab for related imaging Search & Download manifests.


Data TypeDownload all or Query/FilterLicense

Combined SR across 4 collections (DICOM, 1292 files, 10.0 Mb)

(note, no pixel data in SR)

Click to download Combined SR across 4 collectionsImage Removed Image Removed

Click the Download  button to save a ".tcia" manifest file to your computer, which you must open with the  NBIA Data Retriever


Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/50135479/SR_wgllssg1.tcia?api=v2

Download all SR across 4 source collections


Tcia button generator
labelSearch
urlhttps://nbia.cancerimagingarchive.net/nbia-search/?text-search=wgllssg1

Search reports in Radiology Portal


(Download requires NBIA Data Retriever)

Tcia cc by 3

SR for TCGA-BRCA - 164 files 1.2Mb

Click to download TCGA-BRCA SRImage Removed


Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/50135479/TCGA-BRCA_SR.tcia?api=v2

Download TCGA-BRCA clinical SR


(Download requires NBIA Data Retriever)

Tcia cc by 3

SR for ISPY1 - 845 files , 6.6Mb

Click to download ISPY1 SRImage Removed


Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/50135479/ISPY1_SR.tcia?api=v2

Download ISPY1 SR


(Download requires NBIA Data Retriever)

Tcia cc by 3

SR for BREAST-DIAGNOSIS - 94 files, 750kB


Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/50135479/BREAST-DIAGNOSIS_SR.tcia?api=v2

Download BREAST-DIAGNOSIS SR


(Download requires NBIA Data Retriever)

Tcia cc by 3

SR for Breast-MRI-NACT-Pilot
)
 - 189 files, 1.4Mb
Click to download Breast-MRI-NACT-Pilot SRImage Removed


Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/50135479/Breast-MRI-NACT-Pilot_SR.tcia?api=v2

Download Breast-MRI-NACT-Pilot SR


(Download requires NBIA Data Retriever)

Tcia cc by 3


Please contact help@cancerimagingarchive.net  with any questions regarding usage.

Collections Used in this Third Party Analysis
Below is a list of the Collections used in these analyses:

Source Data TypeDownload or SearchLicense
TCGA-BRCA Images (DICOM, 88.1GB)


Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/3539225/TCIA_TCGA-BRCA_09-16-2015.tcia?version=1&modificationDate=1534787408445&api=v2



Tcia button generator
labelSearch
urlhttps://www.cancerimagingarchive.net/nbia-search/?CollectionCriteria=TCGA-BRCA



(Download requires NBIA Data Retriever)

Tcia cc by 3

BREAST-DIAGNOSIS Images (DICOM, 60.8GB)


Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/2621477/TCIA_BREAST-DIAGNOSIS_06-22-2015.tcia?api=v2



Tcia button generator
labelSearch
urlhttps://www.cancerimagingarchive.net/nbia-search/?CollectionCriteria=BREAST-DIAGNOSIS



(Download requires NBIA Data Retriever)

Tcia cc by 3

ISPY1 Images and Segmentations (DICOM, 76.2GB)



Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/20643859/doiJNLP-ISPY1-full-09-26-2016.tcia?version=1&modificationDate=1534787010468&api=v2



Tcia button generator
labelSearch
urlhttps://www.cancerimagingarchive.net/nbia-search/?CollectionCriteria=ISPY1


(Download requires NBIA Data Retriever)


Tcia cc by 3
Breast-MRI-NACT-Pilot Images and Segmentations (DICOM, 19.5 GB)


Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/22513764/doiJNLP-J4OtCtbF.tcia?version=1&modificationDate=1534787445626&api=v2



Tcia button generator
labelSearch
urlhttps://www.cancerimagingarchive.net/nbia-search/?CollectionCriteria=BREAST-MRI-NACT-Pilot


(Download requires NBIA Data Retriever)

Tcia cc by 3





Localtab
titleDetailed Description

Detailed Description

TCIA imaging source files for these SR. You can explore further with the "3rd-Party Analysis Results" radio button options at the lower left of the Search screen.


CollectionDownload or Query/Filter

TCGA-BRCA

ISPY1

BREAST-DIAGNOSIS

Breast-MRI-NACT-PILOT






Localtab
titleCitations & Data Usage Policy

Citations & Data Usage Policy 

 

publictcia-collectionlimited-license-policy

Info
titleData Citation

Clunie D.,  Hickman H.,  Ver Hoef W.,  Hastak S.,  Wagner U.,  Helton E. (2019).  DICOM SR of clinical data and measurement for breast cancer collections to TCIA [Data set]. The Cancer Imaging Archive. https://doi.org/10.7937/TCIA.2019.wgllssg1


Info
titlePublication citation

Clunie, D., Hickman, H., Ver Hoef, W., Hastak, S., Evans, J., Neville, J., & Wagner, U. (2020). Observations from the Data Integration and Imaging Informatics (DI-Cubed) Project. MDPI AG. https://doi.org/10.20944/preprints202008.0474.v1


Info
titleTCIA Citation

Clark K, Vendt B, Smith K, Freymann J, Kirby J, Koppel P, Moore S, Phillips S, Maffitt D, Pringle M, Tarbox L, Prior F. The Cancer Imaging Archive (TCIA): Maintaining and Operating a Public Information Repository, Journal of Digital Imaging, Volume 26, Number 6, December, 2013, pp 1045-1057. DOI; https://doi.org/10.1007/s10278-013-9622-7

In addition to the dataset citation above, please be sure to cite the following if you utilize these data in your research:

Info
titlePublication Citation

coming soon

Other Publications Using This Data

TCIA maintains a list of publications that leverage TCIA data. If you have a manuscript you'd like to add please contact the TCIA Helpdesk.




Localtab
titleVersions

Version 1 (Current): 2020/05/26


Data TypeDownload all or Query/Filter

Combined SR across 4 collections (DICOM, 1292 files, 10.0 Mb)

(note, no pixel data in SR)

Click the Download  button to save a ".tcia" manifest file to your computer, which you must open with the  NBIA Data Retriever

SR for TCGA-BRCA - 164 files 1.2Mb

Click to download TCGA-BRCA SR

SR for ISPY-1 - 845 files , 6.6Mb

Click to download ISPY1 SR

SR for BREAST-DIAGNOSIS - 94 files, 750kB

Click to download BREAST-DIAGNOSIS SR

SR for Breast-MRI-NACT-PILOT - 189 files, 1.4Mb

Click to download Breast-MRI-NACT-Pilot SR





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