Version 2 (Current): Updated 2023/08/31Data Type | Download all or Query/Filter | License |
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Tissue Slide Images (PNG, 1.01 GB) |
Tcia button generator |
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url | https://faspex.cancerimagingarchive.net/aspera/faspex/external_deliveries/419?passcode=c99ddb3c1951b94e9664cb35a092b76637664638 |
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(Download and apply the IBM-Aspera-Connect plugin to your browser to retrieve this faspex package) | |
Version 2 dataset modifications: (1) 35 channels by human error in conversion in the version 1 dataset were corrected. (2) Non-standard im3 format, that is not supported by most platforms/viewers, images were replaced with png format. (3) A lot of images in the multiplex IHC folder were not from the same ROI as the hematoxylin/AEC. Names/labels for all the files were corrected to address this. (4) Grayscale images which do not allow to analyze the original AEC/Hematoxylin colored images, so original-colored images were added. (5) Intensity concordance study was difficult with the old version since the images across AEC/mpIF were not perfectly co-registered. Images are now perfectly co-registered to address this. (6) The original focus was not on the AI-ready datasets. In this version, we release an AI-ready dataset that should work out-of-the-box for multiple tasks using the SOTA deep learning algorithms. Version 1: Updated 2020/06/04Data Type | Download all or Query/Filter |
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Tissue Slide Images (TIFF, IM3, 8.96 GB) |
Tcia button generator |
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url | https://faspex.cancerimagingarchive.net/aspera/faspex/external_deliveries/74?passcode=56970ac8fccfb0cdb926271492d7f3ab3ea8721c |
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Tcia button generator |
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label | Search |
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url | https://pathdb.cancerimagingarchive.net/imagesearch?f[0]=collection:hnscc_mif_mihc_comparison |
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(Download and apply the IBM-Aspera-Connect plugin to your browser to retrieve this faspex package) |
Version 2 of dataset replaced title, summary, acknowledgements, and publication citation with new information. These entries for version 1 dataset may be accessed here. |