This guide is a quick start companion to the Image Submitter Site User's Guide.
Although the examples in this guide are from a Windows computer, the steps are similar for other operating systems. |
For TCGA cases, it is EXTREMELY important that the mapping is done correctly as these TCGA IDs will be the only link between imaging and tissue samples in the NCI Genomic Data Commons portal. Other Collections with supporting information will also need someone to confirm that dates, File IDs, and PatIDs will be resolved across information types. |
TCGA-KIRC-BWH.ID-LOOKUP.properties
.Launcher.jar
file in the CTP folder.admin
and Password password
.If your images are accessible from the computer where CTP is installed, then you can use FileSender to send the images to CTP which will de-identify them and route them to TCIA for curation.
You can also send directly from a PACS. CTP is configured to accept any AET. Most sites use CTP as the AET name if sending from PACS. |
FileSender.jar
.Make sure the last stage “HTTP Export” que is empty before stopping CTP.
Although the import queue will be empty much sooner, keep CTP running. |