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  • Image Data Used in the Simulations of "The Role of Image Compression Standards in Medical Imaging: Current Status and Future Trends" (Image-Compression-Simulation)

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These are the 3D image data used in the simulations of the paper "The Role of Image Compression Standards in Medical Imaging: Current Status and Future Trends". 10 series per collection were selected from ACRIN 6664 (CT COLONOGRAPHY), Data from The Lung Image Database Consortium (LIDC) and Image Database Resource Initiative (IDRI): A completed reference database of lung nodules on CT scans (LIDC-IDRI), The Cancer Genome Atlas Breast Invasive Carcinoma Collection (TCGA-BRCA), and The Cancer Genome Atlas Glioblastoma Multiforme Collection (TCGA-GBM) for analysis.  Lossless and lossy compression algorithms, including JPEG, JPEG-LS, JPEG-XR, JPEG2000, HEVC, are used to compress and decompress the images. Their performances are compared in the paper.

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Localtab Group


Localtab
activetrue
titleData Access

Data Access

Collections Used in this Third Party Analysis

Below is a list of the Collections used in these analyses:

Data TypeDownload all or Query/FilterLicense
Corresponding Original Images from CT COLONOGRAPHY (DICOM)


Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/22518423/doiJNLP_TCGA-COLONOGRAPHY_Data.tcia?api=v2

Download CT COLONOGRAPHY subset

(Download requires NBIA Data Retriever)

Tcia cc by 3

Corresponding Original Images from LIDC-IDRI (DICOM)


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urlhttps://wiki.cancerimagingarchive.net/download/attachments/22518423/doiJNLP_LIDC-IDRI_Data.tcia?api=v2

Download LIDC-IDRI subset

(Download requires NBIA Data Retriever)

Tcia cc by 3

Corresponding Original Images from TCGA-BRCA (DICOM)


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urlhttps://wiki.cancerimagingarchive.net/download/attachments/22518423/doiJNLP_TCGA-BRCA_Data.tcia?api=v2

Download TCGA-BRCA subset

(Download requires NBIA Data Retriever)

Tcia cc by 3

Corresponding Original Images from TCGA-GBM (DICOM)


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urlhttps://wiki.cancerimagingarchive.net/download/attachments/22518423/doiJNLP_TCGA-GBM_Data.tcia?api=v2

Limited access TCGA-GBM subset

(Download requires NBIA Data Retriever)

Tcia restricted license



Localtab
titleDetailed Description

Detailed Description

This Collection used subsets of existing TCIA data. 

Collection StatisticsRadiology
ModalitiesMR,CT
Number of Participants37
Number of Studies40
Number of Series40
Number of Images9,252
Image Size (GB)3.9

manifest (note: includes limited-access data): metadata.csv


Localtab
titleCitations & Data Usage Policy

Citations & Data Usage Policy 

Tcia limited license policy

Info
titleData Citation

Liu, F., Hernandez-Cabrero, M., Sanchez, V., Marcellin, M. W., & Bilgin, A. (2016). Image Data Used in the Simulations of The Role of Image Compression Standards in Medical Imaging: Current Status and Future Trends (Image-Compression-Simulation) [Data set]. The Cancer Imaging Archive. https://doi.org/10.7937/K9/TCIA.2016.xHs

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Info
titlePublication Citation

Liu, F., Hernandez-Cabronero, M., Sanchez, V., Marcellin, M., & Bilgin, A. (2017). The Current Role of Image Compression Standards in Medical Imaging. In Information (Vol. 8, Issue 4, p. 131). MDPI AG. https://doi.org/10.3390/info8040131


Info
titleTCIA Citation

Clark, K., Vendt, B., Smith, K., Freymann, J., Kirby, J., Koppel, P., Moore, S., Phillips, S., Maffitt, D., Pringle, M., Tarbox, L., & Prior, F. (2013). The Cancer Imaging Archive (TCIA): Maintaining and Operating a Public Information Repository. In Journal of Digital Imaging (Vol. 26, Issue 6, pp. 1045–1057). Springer Science and Business Media LLC. https://doi.org/10.1007/s10278-013-9622-7 PMCID: PMC3824915


Other Publications Using This Data

TCIA maintains a list of publications that leverage our data. If you have a manuscript you'd like to add please contact TCIA's Helpdesk.


Localtab
titleVersions

Version 1 (Current): 2016/12/08

Data TypeDownload all or Query/FilterLicense
CT Images (DICOM)


Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/22518423/doiJNLP_TCGA-COLONOGRAPHY_Data.tcia?api=v2

Download CT COLONOGRAPHY subset

(Download requires the NBIA Data Retriever)

Tcia cc by 3

LIDC images (DICOM)


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urlhttps://wiki.cancerimagingarchive.net/download/attachments/22518423/doiJNLP_LIDC-IDRI_Data.tcia?api=v2

Download LIDC-IDRI subset

(Download requires the NBIA Data Retriever)

Tcia cc by 3

TCGA-BRCA images (DICOM)


Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/22518423/doiJNLP_TCGA-BRCA_Data.tcia?api=v2

Download TCGA-BRCA subset

(Download requires the NBIA Data Retriever)

Tcia cc by 3

TCGA-GBM images (DICOM)


Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/22518423/doiJNLP_TCGA-GBM_Data.tcia?api=v2

Limited access TCGA-GBM subset

(Download requires the NBIA Data Retriever)



Tcia restricted license



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