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  • DICOM SR of clinical data and measurement for breast cancer collections to TCIA (DICOM-SR-Breast-Clinical)

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Localtab Group



Localtab
activetrue
titleData Access

Data Access

Please see the Detailed Description tab for related imaging, Search, & Download manifests.


Data TypeDownload all or Query/FilterLicense

Combined SR across 4 collections (DICOM, 1292 files, 10.0 MbMB)

(note, no pixel data in SR)


Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/50135479/SR_wgllssg1.tcia?api=v2

Download all SR across 4 source collections


Tcia button generator
labelSearch
urlhttps://nbia.cancerimagingarchive.net/nbia-search/?ImageModalityCriteria=SR&MinNumberOfStudiesCriteria=1&CollectionCriteria=BREAST-DIAGNOSIS,Breast-MRI-NACT-Pilot,ISPY1,TCGA-BRCA&ThirdPartyCriteria=YES

Search reports in Radiology Portal


(Download requires NBIA Data Retriever)

Tcia cc by 3

SR for TCGA-BRCA - (DICOM, 164 files, 1.2Mb2MB)


Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/50135479/TCGA-BRCA_SR.tcia?api=v2

Download TCGA-BRCA clinical SR


(Download requires NBIA Data Retriever)

Tcia cc by 3

SR for ISPY1- (DICOM, 845 files , 6.6Mb6MB)


Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/50135479/ISPY1_SR.tcia?api=v2

Download ISPY1 SR


(Download requires NBIA Data Retriever)

Tcia cc by 3

SR for BREAST-DIAGNOSIS - (DICOM, 94 files, 750kB750KB)


Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/50135479/BREAST-DIAGNOSIS_SR.tcia?api=v2

Download BREAST-DIAGNOSIS SR


(Download requires NBIA Data Retriever)

Tcia cc by 3

SR for Breast-MRI-NACT-Pilot - (DICOM, 189 files, 1.4Mb4MB)


Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/50135479/Breast-MRI-NACT-Pilot_SR.tcia?api=v2

Download Breast-MRI-NACT-Pilot SR


(Download requires NBIA Data Retriever)

Tcia cc by 3


Please contact help@cancerimagingarchive.net  with any questions regarding usage.

Collections Used in this Third Party Analysis

Below is a list of the Collections used in these analyses:

Source Data TypeDownload or SearchLicense
TCGA-BRCA Images (DICOM, 88.1GB)


Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/3539225/TCIA_TCGA-BRCA_09-16-2015.tcia?version=1&modificationDate=1534787408445&api=v2



Tcia button generator
labelSearch
urlhttps://www.cancerimagingarchive.net/nbia-search/?CollectionCriteria=TCGA-BRCA



(Download requires NBIA Data Retriever)

Tcia cc by 3

BREAST-DIAGNOSIS Images (DICOM, 60.8GB)


Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/2621477/TCIA_BREAST-DIAGNOSIS_06-22-2015.tcia?api=v2



Tcia button generator
labelSearch
urlhttps://www.cancerimagingarchive.net/nbia-search/?CollectionCriteria=BREAST-DIAGNOSIS



(Download requires NBIA Data Retriever)

Tcia cc by 3

ISPY1 Images and Segmentations (DICOM, 76.2GB)



Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/20643859/doiJNLP-ISPY1-full-09-26-2016.tcia?version=1&modificationDate=1534787010468&api=v2



Tcia button generator
labelSearch
urlhttps://www.cancerimagingarchive.net/nbia-search/?CollectionCriteria=ISPY1


(Download requires NBIA Data Retriever)


Tcia cc by 3
Breast-MRI-NACT-Pilot Images and Segmentations (DICOM, 19.5 GB)


Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/22513764/doiJNLP-J4OtCtbF.tcia?version=1&modificationDate=1534787445626&api=v2



Tcia button generator
labelSearch
urlhttps://www.cancerimagingarchive.net/nbia-search/?CollectionCriteria=BREAST-MRI-NACT-Pilot


(Download requires NBIA Data Retriever)

Tcia cc by 3





Localtab
titleDetailed Description

Detailed Description

TCIA imaging source files for these SR. You can explore further with the "3rd-Party Analysis Results" radio button options at the lower left of the Search screen.

CollectionDownload or Query/Filter

TCGA-BRCA

Image Removed

ISPY1

Image Removed

BREAST-DIAGNOSIS

Image Removed

Breast-MRI-NACT-PILOT


Radiology Image Statistics

Modalities

SR

Number of Participants

474

Number of Studies

1,286

Number of Series

1,292

Number of Images

1,292
Image Size10 MB

 You can download all results at once through (Combined SR across 4 collections (DICOM, 1292 files, 10.0 Mb) (note, no pixel data in SR)) or in chunks:

  • SR for TCGA-BRCA - 164 files 1.2Mb
  • SR for ISPY1 - 845 files , 6.6Mb
  • SR for BREAST-DIAGNOSIS - 94 files, 750kB
  • SR for Breast-MRI-NACT-Pilot - 189 files, 1.4Mb
Image Removed





Localtab
titleCitations & Data Usage Policy

Citations & Data Usage Policy 

 

Tcia limited license policy

Info
titleData Citation

Clunie D.,  Hickman H.,  Ver Hoef W.,  Hastak S.,  Wagner U.,  Helton E. (2019).  DICOM SR of clinical data and measurement for breast cancer collections to TCIA [Data set]. The Cancer Imaging Archive. https://doi.org/10.7937/TCIA.2019.wgllssg1


Info
titlePublication citation

Clunie, D., Hickman, H., Ver Hoef, W., Hastak, S., Evans, J., Neville, J., & Wagner, U. (2020). Observations from the Data Integration and Imaging Informatics (DI-Cubed) Project. MDPI AG. https://doi.org/10.20944/preprints202008.0474.v1


Info
titleTCIA Citation

Clark K, Vendt B, Smith K, Freymann J, Kirby J, Koppel P, Moore S, Phillips S, Maffitt D, Pringle M, Tarbox L, Prior F. The Cancer Imaging Archive (TCIA): Maintaining and Operating a Public Information Repository, Journal of Digital Imaging, Volume 26, Number 6, December, 2013, pp 1045-1057. DOI; https://doi.org/10.1007/s10278-013-9622-7

Other Publications Using This Data

TCIA maintains a list of publications that leverage TCIA data. If you have a manuscript you'd like to add please contact the TCIA Helpdesk.




Localtab
titleVersions

Version 1 (Current): Updated 2020/05/26

Data TypeDownload all or Query/FilterLicense

Combined SR across 4 collections (DICOM, 1292 files, 10.0

Mb)

(note, no pixel data in SR)

Image Removed Image Removed

Click the Download  button to save a ".tcia" manifest file to your computer, which you must open with the  NBIA Data Retriever

SR for TCGA-BRCA - 164 files 1.2Mb

Click to download TCGA-BRCA SRImage Removed

SR for ISPY-1 - 845 files , 6.6Mb

Click to download ISPY1 SRImage Removed

MB)


Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/50135479/SR_wgllssg1.tcia?api=v2

Download all SR across 4 source collections


Tcia button generator
labelSearch
urlhttps://nbia.cancerimagingarchive.net/nbia-search/?ImageModalityCriteria=SR&MinNumberOfStudiesCriteria=1&CollectionCriteria=BREAST-DIAGNOSIS,Breast-MRI-NACT-Pilot,ISPY1,TCGA-BRCA&ThirdPartyCriteria=YES

Search reports in Radiology Portal


(Download requires NBIA Data Retriever)

Tcia cc by 3

SR for TCGA-BRCA (DICOM, 164 files, 1.2MB)


Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/50135479/TCGA-BRCA_SR.tcia?api=v2

Download TCGA-BRCA clinical SR


(Download requires NBIA Data Retriever)

Tcia cc by 3

SR for ISPY1 (DICOM, 845 files , 6.6MB)


Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/50135479/ISPY1_SR.tcia?api=v2

Download ISPY1 SR


(Download requires NBIA Data Retriever)

Tcia cc by 3

SR for BREAST-DIAGNOSIS (DICOM, 94 files, 750KB)


Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/50135479/BREAST-DIAGNOSIS_SR.tcia?api=v2

Download BREAST-DIAGNOSIS SR


(Download requires NBIA Data Retriever)

Tcia cc by 3

SR for BREAST-DIAGNOSIS - 94 files, 750kB

Click to download BREAST-DIAGNOSIS SRImage Removed

SR for Breast-MRI-NACT-
PILOT -
Pilot (DICOM, 189 files, 1
.4Mb
.4MB)


Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/50135479/Breast-MRI-NACT-Pilot_SR.tcia?api=v2

Download Breast-MRI-NACT-Pilot SR


(Download requires NBIA Data Retriever)

Tcia cc by 3

Click to download Breast-MRI-NACT-Pilot SRImage Removed