Localtab |
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title | Data Access |
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| Data AccessClick the Download button to save a ".tcia" manifest file to your computer, which you must open with the NBIA Data RetrieverData Type | Download all or Query/Filter | License |
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Histopathology TIL Maps | | Clinical Data | |
Tcia button generator |
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label | Search |
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url | https://cancerimagingarchive.net/datascope/TCGA_TilMap/ |
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Click the Versions tab for more info about data releases. Nci_crdc additional resources |
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| | Note: Please contact help@cancerimagingarchive.net with any questions regarding usage. Additional resources:The following external resources have been made available by the data submitters. These are not hosted or supported by TCIA, but may be useful to researchers utilizing this collection. Collections Used in this Third Party Analysis Below is a list of TCIA Collections used in these analyses:
- TCGA-BLCA,
- TCGA-BRCA,
- TCGA-CESC,
- TCGA-COAD,
- TCGA-LUAD,
- TCGA-LUSC,
- TCGA-PAAD,
- TCGA-PRAD,
- TCGA-READ,
- TCGA-SKCM,
- TCGA-STAD,
- TCGA-UCEC,
- TCGA-UVM
Localtab |
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title | Citations & Data Usage Policy |
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| Citations & Data Usage Policy These collections are freely available to browse, download, and use for commercial, scientific and educational purposes as outlined in the Creative Commons Attribution 3.0 Unported License. Questions may be directed to help@cancerimagingarchive.net. Please be sure to acknowledge both this data set and TCIA in publications by including the following citations in your work: Tcia limited license policy |
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Info |
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| Saltz, J., Gupta, R., Hou, L., Kurc, T., Singh, P., Nguyen, V., … Samaras, D., Shroyer, K. R., Zhao, T., Batiste, R., Van Arnam, J., The Cancer Genome Atlas Research Network, Shmulevich, I., Rao, A. U. K., Lazar, A. J., Sharma, A., & Thorsson, V. (2018). Tumor-Infiltrating Lymphocytes Maps from TCGA H&E Whole Slide Pathology Images [Data set]. The Cancer Imaging Archive. https://doi.org/10.7937/k9K9/tciaTCIA.2018.y75f9w1Y75F9W1 |
Info |
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title | TCIA Publication Citation |
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| Clark K, Vendt B, Smith K, Freymann J, Kirby J, Koppel P, Moore S, Phillips S, Maffitt D, Pringle M, Tarbox L, Prior F. The Cancer Imaging Archive (TCIA): Maintaining and Operating a Public Information Repository, Journal of Digital Imaging, Volume 26, Number 6, December, 2013, pp 1045-1057. (paper) |
In addition to the dataset citation above, please be sure to cite the following if you utilize these data in your research: Info |
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title | Publication Citation |
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| Saltz, J., Gupta, R., Hou, L., Kurc, T., Singh, P., Nguyen, V., . . . Thorsson, V. Spatial Saltz, J., Gupta, R., Hou, L., Kurc, T., Singh, P., Nguyen, V., Samaras, D., Shroyer, K. R., Zhao, T., Batiste, R., Van Arnam, J., The Cancer Genome Atlas Research Network, Shmulevich, I., Rao, A. U. K., Lazar, A. J., Sharma, A., Thorsson, V. (2018). Spatial Organization and Molecular Correlation of Tumor-Infiltrating Lymphocytes Using Deep Learning on Pathology Images. Cell Reports, 23(1), 181-193.e187e7. https://doi.org/10.1016/j.celrep.2018.03.086 |
Info |
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| Clark, K., Vendt, B., Smith, K., Freymann, J., Kirby, J., Koppel, P., Moore, S., Phillips, S., Maffitt, D., Pringle, M., Tarbox, L., & Prior, F. (2013). The Cancer Imaging Archive (TCIA): Maintaining and Operating a Public Information Repository. Journal of Digital Imaging, 26(6), 1045–1057. https://doi.org/10.1007/s10278-013-9622-7 |
Other Publications Using This DataTCIA maintains a list of publications that which leverage TCIA data. If you have a manuscript publication you'd like to add please contact the TCIA's Helpdesk. |
Localtab |
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| Version 1 (Current): 20192018/0812/0217
Data Type | Download all or Query/Filter |
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TIL Maps | | H&E Images and Clinical Data (external) | | H&E Images | | Clinical and Molecular Correlates (external) | |
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