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This data is from a multi-site, multi-parametric quantitative MRI study of adult (18+ years old) females diagnosed with invasive breast cancer. Subjects all had a lesion size >1cm in longest dimension and were undergoing neoadjuvant therapy. Participants were scanned prior to any therapy and then 2-3 times after the initiation of neoadjuvant therapy, depending upon their treatment regimen. All data sets were acquired with a research-only protocol, including: DWI (SE EPI), OGSE, qMT, B0 map, multi-flip T1 map, Bloch-Siegert B1 map, DCE, and a T1-weighted anatomical image. This dataset is an extension of the original QIN-BREAST collection, with updated scan protocols and data collected at both Vanderbilt University Medical Center and the University of Chicago to demonstrate reproducible results at multiple sites (both using Philips 3T MR scanners). |
Acknowledgements
We would like to acknowledge the individuals and institutions that have provided data for this collection:
- Thomas E. Yankeelov, Ph.D. (University of Texas at Austin),
- Gregory S. Karczmar Ph.D. (University of Chicago),
- Richard G. Abramson, M.D. and Lori Arlinghaus, Ph.D. (Vanderbilt University Medical Center)
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active | true |
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title | Data Access |
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| Data AccessWhen you have a TCIA account, please email to help@cancerimagingarchive.net to request access to these data. Data Type | Download all or Query/Filter | License |
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Images (DICOM, 3.9 GB) |
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url | https://wiki.cancerimagingarchive.net/download/attachments/52756887/QIN-BREAST-02_20190408_v1.tcia?version=1&modificationDate=1554747017546&api=v2 |
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label | Search |
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url | https://nbia.cancerimagingarchive.net/nbia-search/?MinNumberOfStudiesCriteria=1&CollectionCriteria=QIN-BREAST-02 |
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(Download requires the NBIA Data Retriever) | | Clinical Data (XLSX) |
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url | https://wiki.cancerimagingarchive.net/download/attachments/52756887/QIN-BREAST-02_clinicalData-Transformed-20191022-Revised20200210.xlsx?version=1&modificationDate=1581525332526&api=v2 |
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| | Acquisition Scan Parameters (XLSX) |
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url | https://wiki.cancerimagingarchive.net/download/attachments/52756887/QIN-BREAST-02_ScanParameters.xlsx?version=1&modificationDate=1562781527456&api=v2 |
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title | Detailed Description |
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| Detailed Description | |
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Modalities | MR | Number of Patients | 13 | Number of Studies | 34 | Number of Series | 235 | Number of Images | 31,790 | Images Size (GB) | 3.9 |
Not all participants completed all rounds of imaging. Clinical spreadsheets are available. Acquisition scan parameter tables are available.
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title | Citations & Data Usage Policy |
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| Citations & Data Usage Policy Tcia limited license policy |
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Please be sure to acknowledge both this data set and TCIA in publications by including the following citations in your work: Info |
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| Yankeelov TE, Karczmar GS, Abramson RG. (2019) Data from QIN-BREAST-02[Dataset]. The Cancer Imaging Archive. doi: 10.7937/TCIA.2019.4cfm06rr |
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| (coming soon) | Info |
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| Clark K, Vendt B, Smith K, Freymann J, Kirby J, Koppel P, Moore S, Phillips S, Maffitt D, Pringle M, Tarbox L, Prior F. The Cancer Imaging Archive (TCIA): Maintaining and Operating a Public Information Repository, Journal of Digital Imaging, Volume 26, Number 6, December, 2013, pp 1045-1057. DOI: 10.1007/s10278-013-9622-7 |
Other Publications Using This DataTCIA maintains a list of publications which leverage TCIA data. If you have a manuscript you'd like to add please contact TCIA's Helpdesk. |
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| Update 2020/02/12: Clinical data table has one code revision, text/numeric values have not changed.Version 1 (Current): Updated 2019/07/10Data Type | Download all or Query/Filter |
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Images (DICOM, 4 GB) |
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url | https://wiki.cancerimagingarchive.net/download/attachments/52756887/QIN-BREAST-02_20190408_v1.tcia?version=1&modificationDate=1554747017546&api=v2 |
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label | Search |
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url | https://nbia.cancerimagingarchive.net/nbia-search/?MinNumberOfStudiesCriteria=1&CollectionCriteria=QIN-BREAST-02 |
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(Download requires the NBIA Data Retriever) | Clinical Data (XLSX) |
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url | https://wiki.cancerimagingarchive.net/download/attachments/52756887/QIN-BREAST-02_clinicalData-Transformed-20191022-Revised20200210.xlsx?version=1&modificationDate=1581525332526&api=v2 |
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| Acquisition Scan Parameters (XLSX) |
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url | https://wiki.cancerimagingarchive.net/download/attachments/52756887/QIN-BREAST-02_ScanParameters.xlsx?version=1&modificationDate=1562781527456&api=v2 |
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Added new subjects, 10/22/2019 corrected error in clinicaldata spreadsheet. |
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