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You should now see the DICOM data in the 3 smaller viewing areas. You can adjust the window level by clicking and holding the left mouse button and moving your mouse. You can also zoom in or out in the same way with the right mouse button.
Loading the NRRD segmentation
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The Model Maker module will now appear on the left side of the screen. Under "IO" change the "Models" drop down box to "Create New ModelHierarchy". This will create a new entry called "Models" in this box.
Click "Apply" at the bottom of the module and should now see a 3D rendering of the NRRD label map in the main viewing window.
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If you prefer you can now tweak some settings to further visualize the data. The following settings are visible in the screenshot below.
- You can toggle between showing the label map with regions outlined or filled by clicking the small pushpin on each of the 2D views and selecting or deselecting the button next to the label map name.
- You can modify the transparency of the label map by using the up/down arrows next to the label map name. The starting value is "1.00" which is fully opaque.
- You can also toggle whether the DICOM slices are visible in the 3D view by clicking the visibility button next to the slice orientation.
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