Versions Compared

Key

  • This line was added.
  • This line was removed.
  • Formatting was changed.

Summary

The standardization and broad-scale integration of DSC-MRI has been confounded by a lack of consensus on DSC-MRI methodology for preventing potential CBV inaccuracies, including the choice of acquisition protocols and post-processing algorithms. Users can use the DRO to investigate the influence of DSC-MRI acquisition and post-processing methods on CBV accuracy, and determination of the impact of DSC-MRI methodology choices on sample size requirements and the assessment of treatment response in clinical glioblastoma trials. The DRO datasets are also being used as part of the QIN-challenge titled “DSC-MRI DRO Challenge. If approved for TCIA inclusion, the archive and this will be the primary access point the institutes use to download the their site-specific DROs. To facilitate this effort, a range of DSC-MRI DROs is available for download from The Cancer Imaging Archive (www.cancerimagingarchive.net) under the collection name [Barrow-DRO]. 

Acquisition Protocol:

A dynamic susceptibility contrast (DSC) digital reference object (DRO) was developed in order validate image acquisition and analysis methods for accurately measuring perfusion parameters in glioblastomas. A validated computational approach for modeling DSC-MRI data served as the basis of the DRO, which is expanded using physiological and kinetic parameters derived from in vivo data and unique voxel-wise 3D tissue structures. To achieve DSC-MRI signals representative of the temporal characteristics, magnitude and distribution of contrast agent-induced T1 and T2* changes observed across multiple glioblastomas, the DRO’s input parameters were trained using DSC-MRI data from 23 glioblastomas (> 40,000 voxels). The DRO’s ability to produce reliable signals for combinations of pulse sequence parameters and contrast agent dosing schemes unlike those in the training dataset was validated by comparison to in vivo dual-echo DSC-MRI data acquired in a separate cohort of patients with glioblastomas. Each DRO (e.g. ones computed for a specific set of acquisition and contrast agent dosing schemes) contains ~10,000 unique voxels. 

Acknowledgements

We would like to acknowledge the individuals and institutions that have provided data for this collection:

  • Hospital/Institution Name city, state, country - Special thanks to First Last Names, degree PhD, MD, etc from the Department of xxxxxx, Additional Names from same location.


  • Continue with any names from additional submitting sites if collection consists of more that one.
    Localtab Group


    Localtab
    activetrue
    titleData Access

    Data Access

    Click the Download button to save a ".tcia" manifest file to your computer, which you must open with the NBIA Data Retriever. Click the Search button to open our Data Portal, where you can browse the data collection and/or download a subset of its contents.

    Data TypeDownload all or Query/Filter
    Images (DICOM, XX.X 4 GB)
    Supplemental Data (format)

    Click the Versions tab for more info about data releases.


    Localtab
    titleDetailed Description

    Detailed Description

    Image Statistics


    Modalities

    MR

    Number of Patients

    1

    Number of Studies

    15

    Number of Series

    180

    Number of Images

    23,580

    Images Size (GB)4

    The field of view contains four regions of interest (ROI)

    Add any additional information as needed below. Likely would be something from site

    per image. The settings for

    • Static field strength,
    • TR,
    • TE,
    • Flip angle,
    • and contrast dose

    are included in the series description of each synthetic timecourse, as in Table 1 of the publication.



    Localtab
    titleCitations & Data Usage Policy

    Citations & Data Usage Policy

    Add any special restrictions in here.

    These collections are freely available to browse, download, and use for commercial, scientific and educational purposes as outlined in the Creative Commons Attribution 3.0 Unported License. Questions may be directed to help@cancerimagingarchive.net. Please be sure to acknowledge both this data set and TCIA in publications by including the following citations in your work:

    Info
    titleData Citation

    DOI goes here. Create using pubhub with information from Collection Approval form


    Info
    titleAcknowledgement

    Natenael B. Semmineh, Ashley M. Stokes, Laura C. Bell, Jerrold L. Boxerman, and C. Chad Quarles. A Population-Based Digital Reference Object (DRO) for Optimizing Dynamic Susceptibility Contrast (DSC)-MRI Methods for Clinical Trials. TOMOGRAPHY, March 2017, Volume 3, Issue 1: 41-49 DOI: 10.18383/j.tom.2016.00286


    Info
    titleTCIA Citation

    Clark K, Vendt B, Smith K, Freymann J, Kirby J, Koppel P, Moore S, Phillips S, Maffitt D, Pringle M, Tarbox L, Prior F. The Cancer Imaging Archive (TCIA): Maintaining and Operating a Public Information Repository, Journal of Digital Imaging, Volume 26, Number 6, December, 2013, pp 1045-1057. DOI: 10.1007/s10278-013-9622-7

    Other Publications Using This Data

    TCIA maintains a list of publications which leverage TCIA data. If you have a manuscript you'd like to add please contact the TCIA Helpdesk.


    Localtab
    titleVersions

    Version 1 (Current): Updated 2019/09/dd

    Data TypeDownload all or Query/Filter
    Images (DICOM, xx.x GB)

    (Requires NBIA Data Retriever.)

    Added new subjects.