Localtab |
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active | true |
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title | Data Access |
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Data Type | Download all or Query/Filter | License |
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Slide Images (.SVS, 53 GB) |
Tcia button generator |
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url | https://faspex.cancerimagingarchive.net/aspera/faspex?context=eyJyZXNvdXJjZSI6InBhY2thZ2VzIiwidHlwZSI6ImV4dGVybmFsX2Rvd25sb2FkX3BhY2thZ2UiLCJpZCI6IjU0MCIsInBhc3Njb2RlIjoiM2I4MDVjNGMxYzViMjY2YmFlMzdmYTcxMmU0ZDgyNzYyZDBjNTE4OSIsInBhY2thZ2VfaWQiOiI1NDAiLCJlbWFpbCI6ImhlbHBAY2FuY2VyaW1hZ2luZ2FyY2hpdmUubmV0In0= |
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Tcia button generator |
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label | Search |
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url | https://pathdb.cancerimagingarchive.net/imagesearch?f%5B0%5D=collection:sln_breast |
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(Download and apply the IBM-Aspera-Connect plugin to your browser to retrieve this faspex package) | | Supplemental Data (CSV, 3kb) |
Tcia button generator |
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url | https://wiki.cancerimagingarchive.net/download/attachments/52763339/target.csv?version=1&modificationDate=1563461391272&api=v2 |
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Click the Versions tab for more info about data releases.
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Localtab |
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title | Detailed Description |
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Image Statistics |
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Modalities | Pathology | Number of Participants | 78 | Number of Images | 130 | Images Size (GB) | 53 |
target.csv contains a binary label for each slide image in the dataset. - target=1 means that the image contains breast cancer metastases.
- target=0 means that the image does not contain breast cancer metastases.
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Localtab |
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title | Citations & Data Usage Policy |
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| Tcia limited license policy |
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Info |
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title | Publication Citation |
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| Campanella, G., Hanna, M. G., Geneslaw, L., Miraflor, A., Werneck Krauss Silva, V., Busam, K. J., Brogi, E., Reuter, V. E., Klimstra, D. S., & Fuchs, T. J. (2019). Clinical-grade computational pathology using weakly supervised deep learning on whole slide images. Nature Medicine (Vol. 25, Issue 8, pp. 1301–1309). Springer Science and Business Media LLC. https://doi.org/10.1038/s41591-019-0508-1 |
Info |
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| Clark K, Vendt B, Smith K, Freymann J, Kirby J, Koppel P, Moore S, Phillips S, Maffitt D, Pringle M, Tarbox L, Prior F. The Cancer Imaging Archive (TCIA): Maintaining and Operating a Public Information Repository, Journal of Digital Imaging, Volume 26, Number 6, December, 2013, pp 1045-1057. DOI: 10.1007/s10278-013-9622-7 |
TCIA maintains a list of publications which leverage TCIA data. If you have a manuscript you'd like to add please contact TCIA's Helpdesk. |
Localtab |
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Data Type | Download all or Query/Filter |
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Images (.SVS, 53 GB) |
Tcia button generator |
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url | https://faspex.cancerimagingarchive.net/aspera/faspex?context=eyJyZXNvdXJjZSI6InBhY2thZ2VzIiwidHlwZSI6ImV4dGVybmFsX2Rvd25sb2FkX3BhY2thZ2UiLCJpZCI6IjU0MCIsInBhc3Njb2RlIjoiM2I4MDVjNGMxYzViMjY2YmFlMzdmYTcxMmU0ZDgyNzYyZDBjNTE4OSIsInBhY2thZ2VfaWQiOiI1NDAiLCJlbWFpbCI6ImhlbHBAY2FuY2VyaW1hZ2luZ2FyY2hpdmUubmV0In0= |
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Tcia button generator |
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label | Search |
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url | https://pathdb.cancerimagingarchive.net/imagesearch?f%5B0%5D=collection:sln_breast |
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(Download and apply the IBM-Aspera-Connect plugin to your browser to retrieve this faspex package) | Supplemental Data (CSV) |
Tcia button generator |
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url | https://wiki.cancerimagingarchive.net/download/attachments/52763339/target.csv?version=1&modificationDate=1563461391272&api=v2 |
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(Download requires the NBIA Data Retriever) |
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