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Localtab Group



Localtab
activetrue
titleData Access

Data Access

Data TypeDownload all or Query/FilterLicense
Images (DICOM + NIFTI, 15.8GB)


Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/18514286/qin-dce-mri-challenge_DCM_NIFTI.tcia?version=1&modificationDate=1534786993310&api=v2



Tcia button generator
labelSearch
urlhttps://www.cancerimagingarchive.net/nbia-search/?CollectionCriteria=QIN%20Breast%20DCE-MRI



(Download requires the NBIA Data Retriever)

Tcia cc by 3

Images (Matlab, 8.4GB)


Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/18514286/qin-dce-mri-challenge_Matlab.jnlp?version=1&modificationDate=1416273279384&api=v2



Tcia button generator
labelSearch
urlhttps://public.cancerimagingarchive.net/nbia-search/?saved-cart=nbia-9971689371318441



Tcia cc by 3

Pathological Response (XLS, 10 kB)


Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/18514286/QIN-Breast-DCE-MRI_Response.xlsx?version=1&modificationDate=1467916192583&api=v2



Tcia cc by 3

Population-averaged AIF timecourse (XLSX, 24 kB)


Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/18514286/QIN%2BBreast%2BDCE-MRI_AIF.xlsx?version=1&modificationDate=1555605930976&api=v2



Tcia cc by 3


Click the Versions tab for more info about data releases.

Nci_crdc additional resources




Localtab
titleDetailed Description

Detailed Description


Collection Statistics


Modalities

MR, KO

Number of Participants

10

Number of Studies

20

Number of Series

672

Number of Images

76,328

Image Size (GB)49.5



Matlab and NIFTI Data

As part of the multi-QIN center challenge additional files were created to help facilitate participation.  There are essentially two versions of the data available.  These files are available inside of TCIA alongside the DICOM data.

  1. Matlab - contains all relevant information including the raw image data, DICOM header info, and all other relevant parameters necessary to analyze the data for the challenge.  There is no need to download the raw DICOM data if you prefer this format.
  2. DICOM + NIFTI - useful if you'd prefer to work in 3D Slicer or some other application which supports DICOM and NIFTI formats

Clinical Data

Pathologic response status for the patients:

  • Complete response
    • QIN-Breast-DCE-MRI-BC05
    • QIN-Breast-DCE-MRI-BC06
    • QIN-Breast-DCE-MRI-BC15
  • Non-complete response
    • QIN-Breast-DCE-MRI-BC01
    • QIN-Breast-DCE-MRI-BC08
    • QIN-Breast-DCE-MRI-BC10
    • QIN-Breast-DCE-MRI-BC12
    • QIN-Breast-DCE-MRI-BC13
    • QIN-Breast-DCE-MRI-BC14
    • QIN-Breast-DCE-MRI-BC16

For inquiries on AIF (Arterial Input Function) used for pharmacokinetic analysis of the breast DCE-MRI data, users are encouraged to start here:

Please contact help@cancerimagingarchive.net with any questions regarding usage.




Localtab
titleCitations & Data Usage Policy

Citations & Data Usage Policy 

Tcia limited license policy


Info
titleData Citation

Huang, W., Tudorica, A., Chui, S., Kemmer, K., Naik, A., Troxell, M., Oh, K., Roy, N., Afzal, A., & Holtorf, M. (2014). Variations of dynamic contrast-enhanced magnetic resonance imaging in evaluation of breast cancer therapy response: a multicenter data analysis challenge (QIN Breast DCE-MRI) (Version 2) [Data set]. The Cancer Imaging Archive. https://doi.org/10.7937/k9/tcia.2014.a2n1ixox



Info
titlePublication Citation

Huang, W., Li, X., Chen, Y., Li, X., Chang, M.-C., Oborski, M. J., Malyarenko, D. I., Muzi, M., Jajamovich, G. H., Fedorov, A., Tudorica, A., Gupta, S. N., Laymon, C. M., Marro, K. I., Dyvorne, H. A., Miller, J. V., Barbodiak, D. P., Chenevert, T. L., Yankeelov, T. E., Mountz J.M., Kinahan P.E., Kikinis R., Taouli B., Fennessy F., & Kalpathy-Cramer, J. (2014). Variations of Dynamic Contrast-Enhanced Magnetic Resonance Imaging in Evaluation of Breast Cancer Therapy Response: A Multicenter Data Analysis Challenge. In Translational Oncology (Vol. 7, Issue 1, pp. 153–166). Elsevier BV. https://doi.org/10.1593/tlo.13838 PMCID: PMC3998693



Info
titleTCIA Citation

Clark, K., Vendt, B., Smith, K., Freymann, J., Kirby, J., Koppel, P., Moore, S., Phillips, S., Maffitt, D., Pringle, M., Tarbox, L., & Prior, F. (2013). The Cancer Imaging Archive (TCIA): Maintaining and Operating a Public Information Repository. In Journal of Digital Imaging (Vol. 26, Issue 6, pp. 1045–1057). Springer Science and Business Media LLC. https://doi.org/10.1007/s10278-013-9622-7 PMCID: PMC3824915



Other Publications Using This Data

TCIA maintains a list of publications which leverage our data. If you have a manuscript you'd like to add, please contact TCIA's Helpdesk.




Localtab
titleVersions

Version 2 (Current): Updated 2019/04/18


Data TypeDownload all or Query/Filter
Images (DICOM + NIFTI, 15.8GB)


Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/18514286/qin-dce-mri-challenge_DCM_NIFTI.tcia?version=1&modificationDate=1534786993310&api=v2



Tcia button generator
labelSearch
urlhttps://www.cancerimagingarchive.net/nbia-search/?CollectionCriteria=QIN%20Breast%20DCE-MRI


  

(Download requires the NBIA Data Retriever)

Images (Matlab, 8.4GB)


Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/18514286/qin-dce-mri-challenge_Matlab.jnlp?version=1&modificationDate=1416273279384&api=v2



Tcia button generator
labelSearch
urlhttps://public.cancerimagingarchive.net/ncia/login.jsf



Population-averaged AIF timecourse (XLSX)


Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/18514286/QIN%2BBreast%2BDCE-MRI_AIF.xlsx?version=1&modificationDate=1555605930976&api=v2




Added AIF Spreadsheet at the request of the PI

Version 1 : Updated 2014/07/02


Data TypeDownload all or Query/Filter
Images (DICOM + NIFTI, 15.8GB)


Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/18514286/qin-dce-mri-challenge_DCM_NIFTI.tcia?version=1&modificationDate=1534786993310&api=v2



Tcia button generator
labelSearch
urlhttps://www.cancerimagingarchive.net/nbia-search/?CollectionCriteria=QIN%20Breast%20DCE-MRI


  

Images (Matlab, 8.4GB)


Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/18514286/qin-dce-mri-challenge_Matlab.jnlp?version=1&modificationDate=1416273279384&api=v2



Tcia button generator
labelSearch
urlhttps://public.cancerimagingarchive.net/ncia/login.jsf



Pathological Response (XLSX)


Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/18514286/QIN-Breast-DCE-MRI_Response.xlsx?api=v2







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