Child pages
  • Cancer Moonshot Biobank - Gastroesophageal Cancer Collection (CMB-GEC)

Versions Compared

Key

  • This line was added.
  • This line was removed.
  • Formatting was changed.
Comment: updating pathology download link with new URL following Faspex update

...

Localtab Group


Localtab
activetrue
titleData Access

Data Access

Data TypeDownload all or Query/FilterLicense

Images (DICOM, 839 MB)


Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/127665431/CMB-GEC%20manifest%20August%202022.tcia?api=v2



Tcia button generator
labelSearch
urlhttps://nbia.cancerimagingarchive.net/nbia-search/?MinNumberOfStudiesCriteria=1&CollectionCriteria=CMB-GEC



(Download requires the NBIA Data Retriever)

Tcia cc by 4

Tissue Slide Images, Pathology Metadata (SVS, JSON, 103 MB)


Tcia button generator
urlhttps://faspex.cancerimagingarchive.net/aspera/faspex/external_deliveries/313?passcode=f3b76cfbdf7f6ecfb5f9b507a433cb304ab4764c?context=eyJyZXNvdXJjZSI6InBhY2thZ2VzIiwidHlwZSI6ImV4dGVybmFsX2Rvd25sb2FkX3BhY2thZ2UiLCJpZCI6IjQ2NiIsInBhc3Njb2RlIjoiZGY2MjZjZGRkMTY1YWRjNGY4MGE4MjI4NjJiZTk2ZDE1NDBkM2U1NSIsInBhY2thZ2VfaWQiOiI0NjYiLCJlbWFpbCI6ImhlbHBAY2FuY2VyaW1hZ2luZ2FyY2hpdmUubmV0In0=



Tcia button generator
labelSearch
urlhttps://pathdb.cancerimagingarchive.net/eaglescope/dist/?configurl=%2Fsystem%2Ffiles%2Fcollectionmetadata%2F202208%2Fbiobank_metadata_page_first50_4.json&filterState=%5B%7B%22id%22%3A%22TCIA_Collection%22%2C%22title%22%3A%22Collection%22%2C%22field%22%3A%22TCIA_Collection%22%2C%22operation%22%3A%22eq%22%2C%22values%22%3A%22CMB-GEC%22%7D%5D


(Download requires Aspera)

Tcia cc by 4


Click the Versions tab for more info about data releases.

Biobank additional resources

The NCI Cancer Research Data Commons (CRDC) provides access to additional data and a cloud-based data science infrastructure that connects data sets with analytics tools to allow users to share, integrate, analyze, and visualize cancer research data.


Localtab
titleDetailed Description

Detailed Description

Image Statistics

Radiology Image Statistics

Pathology Image Statistics

Modalities

CT, PT

WSI

Number of Patients

11

Number of Studies

4

N/A

Number of Series

14

N/A

Number of Images

1293

3
Images Size (MB)839103

Include Page
Cancer Moonshot Biobank Date Handling
Cancer Moonshot Biobank Date Handling


Localtab
titleCitations & Data Usage Policy

Citations & Data Usage Policy

Tcia limited license policy

Info
titleData Citation

Cancer Moonshot Biobank. (2022). Cancer Moonshot Biobank - Gastroesophageal Cancer Collection (CMB-GEC) (Version 1) [Data set]. The Cancer Imaging Archive. https://doi.org/10.7937/E7KH-R486


Info
titleAcknowledgement

The Cancer Moonshot Biobank program requests that publications using data from this program include the following statement: “Data used in this publication were generated by the National Cancer Institute Cancer Moonshot Biobank.”


Info
titleTCIA Citation

Clark, K., Vendt, B., Smith, K., Freymann, J., Kirby, J., Koppel, P., Moore, S., Phillips, S., Maffitt, D., Pringle, M., Tarbox, L., & Prior, F. (2013). The Cancer Imaging Archive (TCIA): Maintaining and Operating a Public Information Repository. In Journal of Digital Imaging (Vol. 26, Issue 6, pp. 1045–1057). Springer Science and Business Media LLC. https://doi.org/10.1007/s10278-013-9622-7

Other Publications Using This Data

TCIA maintains a list of publications which leverage TCIA data. If you have a manuscript you'd like to add please contact the TCIA Helpdesk.


Localtab
titleVersions

Version 1 (Current): Updated 2022/08/12

Data TypeDownload all or Query/FilterLicense
Images (DICOM, 839 MB)


Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/127665431/CMB-GEC%20manifest%20August%202022.tcia?api=v2



Tcia button generator
labelSearch
urlhttps://nbia.cancerimagingarchive.net/nbia-search/?MinNumberOfStudiesCriteria=1&CollectionCriteria=CMB-GEC



(Requires NBIA Data Retriever.)

Tcia cc by 4

Tissue Slide Images (SVS,  103 MB)


Tcia button generator
urlhttps://faspex.cancerimagingarchive.net/aspera/faspex/external_deliveries/313?passcode=f3b76cfbdf7f6ecfb5f9b507a433cb304ab4764c?context=eyJyZXNvdXJjZSI6InBhY2thZ2VzIiwidHlwZSI6ImV4dGVybmFsX2Rvd25sb2FkX3BhY2thZ2UiLCJpZCI6IjQ2NiIsInBhc3Njb2RlIjoiZGY2MjZjZGRkMTY1YWRjNGY4MGE4MjI4NjJiZTk2ZDE1NDBkM2U1NSIsInBhY2thZ2VfaWQiOiI0NjYiLCJlbWFpbCI6ImhlbHBAY2FuY2VyaW1hZ2luZ2FyY2hpdmUubmV0In0=



Tcia button generator
labelSearch
urlhttps://pathdb.cancerimagingarchive.net/eaglescope/dist/?configurl=%2Fsystem%2Ffiles%2Fcollectionmetadata%2F202208%2Fbiobank_metadata_page_first50_4.json&filterState=%5B%7B%22id%22%3A%22TCIA_Collection%22%2C%22title%22%3A%22Collection%22%2C%22field%22%3A%22TCIA_Collection%22%2C%22operation%22%3A%22eq%22%2C%22values%22%3A%22CMB-GEC%22%7D%5D


(Download requires Aspera)

Tcia cc by 4



...