Summary
| Excerpt |
|---|
 Image AddedThis collection contains prostate’s zonal segmentation for 98 cases randomly selected from the SPIE-AAPM-NCI PROSTATEx ChallengeChallenges (PROSTATEx). The four-class segmentation encompasses the peripheral zone, transition zone, fibromuscular stroma and the distal prostatic urethra. As underlying images, we used transversal T2w scans. Segmentations were created by a medical student with experience in prostate segmentation and an expert urologist who instructed the student and double-checked the segmentations in the end. The DICOM representation of these segmentations were generated with dcmqi. Note: If this dataset is used for commercial purposes, please contact office@isg.cs.uni-magdeburg.de |
Acknowledgements
We would like to acknowledge the individuals and institutions that have provided data for this collection:
...
Hospital/Institution Name city, state, country - Special thanks to First Last Names, degree PhD, MD, etc from the Department of xxxxxx, Additional Names from same location.
Acknowledgements
This work has been funded by the EU and the federal state of Saxony-Anhalt, Germany under grant number ZS/2016/08/80388. We would like to thank the authors of the PROSTATEx challenge for providing this valuable dataset
...
.
| Localtab Group |
|---|
| Localtab |
|---|
| active | true |
|---|
| title | Data Access |
|---|
| Data Access| Data Type | Download all or Query/Filter |
|---|
Images, Segmentations, and Radiation Therapy Structures/Doses/Plans License |
|---|
Segmentations (DICOM, |
XX.X GB)<< latter two items only if DICOM SEG/RTSTRUCT/RTDOSE/PLAN exist >>143 MB) |
| Tcia button generator |
|---|
| url | https://wiki.cancerimagingarchive.net/download/attachments/70230177/ProstateX%20Zone%20Segmentations%20manifest_20201125.tcia?api=v2 |
|---|
|
|
|
(Download requires the NBIA Data Retriever) Tissue Slide Images (SVS, XX.X GB) | | Tcia button generator |
|---|
| Tcia button generator |
|---|
| | https://nbia.cancerimagingarchive.net/nbia-search/?MinNumberOfStudiesCriteria=1&DateRange=11/01/2020-11/06/2020&CollectionCriteria=PROSTATEx&ThirdPartyCriteria=YES |
|
|
(Requires NBIA Data Retriever.) | |
Click the Versions tab for more info about data releases. Collections Used in this Third Party AnalysisBelow is a list of the Collections used in these analyses: | Source Data Type | Download all or Query/Filter | License |
|---|
| Corresponding Original MR Images from PROSTATEx (DICOM, 558 MB |
Clinical data (CSVGenomics (web |
|---|
| url | https://wiki.cancerimagingarchive.net/download/attachments/70230177/ProstateX%20Zone%20Segmentations%20Corresponding%20Orignial%20files%20manifest_20201125.tcia?api=v2 |
|---|
|
|
(Requires NBIA Data Retriever.) | |
buttongenerator | Please contact help@cancerimagingarchive.net with any questions regarding usage. |
| Localtab |
|---|
| title | Detailed Description |
|---|
| Detailed DescriptionImage Statistics |
|
|---|
Modalities | SEG | Number of Patients | 98 | Number of Studies | 98 | Number of Series | 98 | Number of Images | 98 | | Images Size (GBMB) |
|
| Localtab |
|---|
| title | Citations & Data Usage Policy |
|---|
| Citations & Data Usage Policylicense-4-internationaltcia4-noncommercial| Info |
|---|
| DOI goes here. Create using Datacite with information from Collection Approval formMeyer, A., Schindele, D., von Reibnitz, D., Rak, M., Schostak, M., & Hansen, C. (2020). PROSTATEx Zone Segmentations [Data set]. The Cancer Imaging Archive. https://doi.org/10.7937/TCIA.NBB4-4655 |
| Info |
|---|
| title | Publication Citation |
|---|
| We ask on the proposal form if they have ONE traditional publication they'd like users to cite. | | Info |
|---|
| Only if they ask for special acknowledgments like funding sources, grant numbers, etc in their proposal.Meyer, A., Rakr, M., Schindele, D., Blaschke, S., Schostak, M., Fedorov, A., & Hansen, C. (2019, April). Towards Patient-Individual PI-Rads v2 Sector Map: Cnn for Automatic Segmentation of Prostatic Zones From T2-Weighted MRI. 2019 IEEE 16th International Symposium on Biomedical Imaging (ISBI 2019). 2019 IEEE 16th International Symposium on Biomedical Imaging (ISBI). https://doi.org/10.1109/isbi.2019.8759572 |
| Info |
|---|
| Clark K, Vendt B, Smith K, Freymann J, Kirby J, Koppel P, Moore S, Phillips S, Maffitt D, Pringle M, Tarbox L, Prior F. The Cancer Imaging Archive (TCIA): Maintaining and Operating a Public Information Repository, Journal of Digital Imaging, Volume 26, Number 6, December, 2013, pp 1045-1057. DOI: 10.1007/s10278-013-9622-7 |
Other Publications Using This DataTCIA maintains a list of publications which leverage TCIA data. If you have a manuscript you'd like to add please contact the TCIA Helpdesk. |
| Localtab |
|---|
| Version X 1 (Current): Updated yyyy 2020/mm11/dd25| Data Type | Download all or Query/Filter |
|---|
| Images Segmentations (DICOM, xx.x GB143 MB) |
| Tcia button generator |
|---|
| url | https://wiki.cancerimagingarchive.net/download/attachments/70230177/ProstateX%20Zone%20Segmentations%20manifest_20201125.tcia?api=v2 |
|---|
|
|
(Requires NBIA Data Retriever.) | | Clinical Data (CSV) | Link | | url | https://nbia.cancerimagingarchive.net/nbia-search/?MinNumberOfStudiesCriteria=1&DateRange=11/25/2020-11/25/2020&CollectionCriteria=PROSTATEx&ThirdPartyCriteria=YES |
|---|
|
|
| | Corresponding Original MR Images from PROSTATEx (DICOM, 558 MBOther (format) | |
| url | https://wiki.cancerimagingarchive.net/download/attachments/70230177/ProstateX%20Zone%20Segmentations%20Corresponding%20Orignial%20files%20manifest_20201125.tcia?api=v2 |
|---|
|
|
|
|
|