The Cancer Imaging Archive (TCIA) Public Access

Space shortcuts

Child pages
  • Publications

Versions Compared

Old Version 148

changes.mady.by.user Sean Berryman

Saved on

compared with

New Version 149

changes.mady.by.user Sean Berryman

Saved on

Key

  • This line was added.
  • This line was removed.
  • Formatting was changed.

...

  1. Prior, F., Smith, K., Sharma, A., Kirby, J., Tarbox, L., Clark, K., Bennett, W., Nolan, T., Freymann, J. (2017). The public cancer radiology imaging collections of The Cancer Imaging Archive. Nature Scientific Data, 4; 1-7. doi:10.1038/sdata.2017.124 

  2. Kohli, M., Morrison, J. J., Wawira, J., Morgan, M. B., & Hostetter, J., Genereaux, B., Hussain, M., Langer S. G. (2017). Creation and curation of the society of imaging informatics in medicine hackathon dataset. Journal of Digital Imaging, 1-4. doi:10.1007/s10278-017-0003-5

  3. Williamson, J.F., Das, S.K., Goodsitt, M.S., Deasy, J.O. (2017). Introducing the Medical Physics Dataset Article. Med. Phys. 44(2); 349-350. doi: 10.1002/mp.12003
  4. Nida, N; Khan, M. (2016). Efficient Colorization of Medical Imaging based on Colour Transfer Method. U.G. Proceedings of the Pakistan Academy of Sciences: B. Life and Environmental Sciences, 53(4); 253-261. (link)
  5. Kalpathy-Cramer, J., Zhao, B., Goldgof, D., Gu, Y., Wang, X., Yang, H., Tan, Y., Gillies, R., Napel, S. (2016). A Comparison of Lung Nodule Segmentation Algorithms: Methods and Results from a Multi-institutional Study. J Digit Imaging 29(4):476-487. DOI: 10.1007/s10278-016-9859-z

  6. Parks, C.L., Monson, K.L. (2016). Automated Facial Recognition of Computed Tomography-Derived Facial Images: Patient Privacy Implications. Journal of Digital Imaging. 1-11. DOI: 10.1007/s10278-016-9932-7

  7. Huang, B.E., Mulyasasmita, W., Rajagopal, G. (2016). The Path from Big Data to Precision Medicine. Expert Review of Precision Medicine and Drug Development, 1(2):129-143. (link)

  8. Chatellier, G., Varlet, V., Blachier-Poisson, C. (2016). "Big data" and "open data": What kind of access should researchers enjoy? Therapie. 71(1); 97-105, 107-114.(link)
  9. Benedict, S.H., Hoffman K., Martel, M.K., Abernethy, A.P., Asher, A.L., Capala, J., Chen, R.C., Chera, B., Couch, J., Deye, J., Efstathiou, J.A., Ford, E., Fraass, B.A., Gabriel, P.E., Huser, V., Kavanagh, B.D., Khuntia, D., Marks, L.B., Mayo, C., McNutt, T., Miller, R.S., Moore, K.L., Prior, F., Roelofs, E., Rosenstein, B.S., Sloan, J., Theriault, A., Vikram, B. (2016). Overview of the American Society for Radiation Oncology–National Institutes of Health–American Association of Physicists in Medicine Workshop 2015: Exploring Opportunities for Radiation Oncology in the Era of Big Data. International Journal of Radiation Oncology: Biology, Physics. 95(3):873-879 (link)
  10. Toga, A.W., Dinov, I.D. (2015). Sharing big biomedical data. Journal of Big Data. 2(1); 1-12. (link)
  11. Moore, S.M., Maffitt, D.R., Smith, K.E., Kirby, J.S., Clark, K.W., Freymann, J.B., Vendt, B.A., Tarbox, L.R., Prior, F.W. (2015). De-identification of Medical Images with Retention of Scientific Research Value. RadioGraphics. 35(3); 727-35. doi: 10.1148/rg.2015140244.
  12. Mayo, C.S., Deasy, J.O., Chera, B.S., Freymann, J., Kirby, J.S., Hardenberg, P.H. (2016). How Can We Effect Culture Change Toward Data-Driven Medicine? International Journal of Radiation Oncology: Biology, Physics. 95(3); 916-21. (link)
  13. Kirby, J., Tarbox, L., Freymann, J., Jaffe, C., Prior, F. (2015). "TU-AB-BRA-03: The Cancer Imaging Archive: Supporting Radiomic and Imaging Genomic Research with Open-Access Data Sets." Medical physics 42(6): 3587-3587.  DOI: 10.1118/1.4925508
  14. GIllies, R.J., Kinahan, P.E., Hricak, H., (2016). Radiomics: Images Are More than Pictures, They Are Data. Radiology, 278(2); 563-77. (link)
  15. Fedorov, A., Clunie, D., Ulrich, E., Bauer, C., Wahle, A., Brown, B., Onken, M., Riesmeier, J., Pieper, S., Kikinis, R., Buatti, J., Beichel, R.R. (2016). DICOM for quantitative imaging biomarker development: A standards based approach to sharing of clinical data and structured PET/CT analysis results in head and neck cancer research. PeerJ, 4(e2057). (link)
  16. Commean, P.K., Rathmell, J.M., Clark, K.W., Maffitt, D.R., Prior, F.W. (2015). A Query Tool for Investigator Access to the Data and Images of the National Lung Screening Trial. Journal of Digital Imaging. 1-9. (paper)
  17. Bourne, P.E. (2015). DOIs for DICOM Raw Images: Enabling Science Reproducibility. Radiology. 275(1); 3-4. link. 
  18. Armato, S.G., Hadjiiski, L., Tourassi, G.D., Drukker, K., Giger, M.L., Li, F., Redmond, G., Farahani, K., Kirby, J.S., Clarke, L.P. (2015). Special Section Guest Editorial: LUNGx Challenge for computerized lung nodule classification: reflections and lessons learned. Journal of Medical Imaging. 2(2); 10.1117/1.JMI.2.2.020103
  19. Herskovits, E.H. (2014). Quantitative Radiology: Applications to Oncology. Emerging Applications of Molecular Imaging to Oncology. 124; 1-30. (link)
  20. Gutman DA, D.A., Dunn Jr WD., W.D., Cobb, J., Stoner RM, R.M., Kalpathy-Cramer, J., Erickson, B. (2014) Web based tools for visualizing imaging data and development of XNATView, a zero footprint image viewer. Frontiers in Neuroinformatics. 2014; 8. (paper)
  21. Erickson BJ, B.J., Fajnwaks, P., Langer SG, S.G., and Perry, J. (2014) Multisite Image Data Collection and Management Using the RSNA Image Sharing Network., Translational oncology, 2014. 7(1):; 36-39. (paper)
  22. Prior FW, F.W., Clark, K., Commean, P., Freymann, J., Jaffe, C., Kirby, J., Moore, S., Smith, K., Tarbox, L., Vendt, B. (2013) TCIA: an information resource to enable open science. Engineering in Medicine and Biology Society (EMBC), 2013 35th Annual International Conference of the IEEE; 2013. (paper)
  23. Gutman DA, D.A., Cobb, J., Somanna, D, et al.., Park, Y., Wang, F., Kurc, T., Saltz, J.H., Brat, D.J., Cooper, L.A. (2013) Cancer Digital Slide Archive: an informatics resource to support integrated in silico analysis of TCGA pathology data.,  Journal of the American Medical Informatics Association, 2013. 20(6): p. ; 1091-1098. doi: 10.1136/amiajnl-2012-001469 (paper)
  24. Clark K, Vendt B, Smith K, Freymann J, Kirby J, Koppel P, Moore S, Phillips S, Maffitt D, Pringle M, Tarbox L, Prior F. The Cancer Imaging Archive (TCIA): Maintaining and Operating a Public Information Repository, Journal of Digital Imaging, 26(6), December, 2013, pp 1045-1057. (paper)
  25. Villani L and Prati RC. Classificação Multirrótulo na Anotação Automática de Nódulo Pulmonar Solitário. Congresso Brasileiro de Informática em Saúde (CBIS’2012). Citado na. 2012.(paper)
  26. Mongkolwat P, Channin DS, Kleper V, Rubin DL. Informatics in Radiology: An Open-Source and Open-Access Cancer Biomedical Informatics Grid Annotation and Image Markup Template Builder.Radiographics .2012. 32(4):1223-32. (paper).
  27. Jaffe, C Carl. Imaging and Genomics: Is There a Synergy?. Radiology. 2012. 264(2):329-31.(paper).

  28. Freymann JB, Kirby JS, Perry JH, Clunie DA, and Jaffe CC. Image data sharing for biomedical research—meeting HIPAA requirements for de-identification.Journal of Digital Imaging 25, no. 1 (2012): 14-24. (paper)

...