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Summary

Description

Large dataset of nucleus segmentations in whole slide tissue images with quality control results are available here. There are two subsets of data: (1) automatic nucleus segmentation data of 5,060 whole slide tissue images of 10 cancer types, with quality control results. (2) manual nucleus segmentation data of 1,356 image patches from the same 10 cancer types plus additional 4 cancer types.

These 5,060 Whole Slide Images (WSIs) are from the following 10 cancer types:

BLCABladder urothelial carcinoma
BRCABreast invasive carcinoma
CESCCervical squamous cell carcinoma and endocervical adenocarcinoma
GBMGlioblastoma Multiforme
LUADLung adenocarcinoma
LUSCLung squamous cell carcinoma
PAADPancreatic adenocarcinoma
PRADProstate adenocarcinoma
SKCMSkin Cutaneous Melanoma
UCECUterine Corpus Endometrial Carcinoma

Note that you can also download segmentation data of following 4 cancer types, although they are not officially verified or released.

COAD Colon adenocarcinoma
READ Rectal adenocarcinoma
STAD Stomach adenocarcinoma
UVM Uveal Melanoma

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   <span property="dct:title">Dataset of Segmented Nuclei in Hematoxylin and Eosin Stained Histopathology Images of 10 Cancer Types (collection nucleus:segmentation)</span>.
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