Description
Image Added
This subset of NSCLC Radiogenomics
Summary
...
...
contains images from patients with non-small cell lung cancer (NSCLC) imaged prior to surgical excision with both thin-section computed tomography (CT) and whole body positron emissions tomography (PET)/CT scans acquired under Institutional Review Board approval from
...
Stanford University and the Veterans Administration Palo Alto Health Care System. The first installment of 26 cases (see shared list "NSCLC Radiogenomics: Initial Stanford Study of 26 Cases") corresponds to microarray data acquired from the excised samples, which is available on the National Center for Biotechnology Information (NCBI) Gene Expression Omnibus , where Digital Imaging and Communications in Medicine (DICOM) patient names are identical to microarray sample names. For scientific inquiries relating to the data-set, please contact Drs. Sandy Napel ( snapel@stanford.edu ) or Sylvia K. Plevritis ( sylvia.plevritis@stanford.edu ).
...
...
Info |
---|
You can view and download these images on TCIA by loggin and selecting the NSCLC Radiogenomics collection. |
Collection Statistics | (updated 2/28/2013) |
---|
Modalities | PET, CT |
Number of Patients | 26 |
Number of Studies | 52 |
Number of Series | 128 |
Number of Images | 36,593 |
Images Size (GB) | 105 |
If you are unsure how to download this collection, please view Searching by Collection or refer to our TCIA's User's Guide for more detailed instructions on using the site.
Shared Lists
Access Click the Download button to save a ".tcia" manifest file to your computer, which you must open with the NBIA Data Retriever Data Type | Download all or Query/Filter |
---|
Images (DICOM) | | Microarray Samples | | Please contact help@cancerimagingarchive.net with any questions regarding usage. |
Localtab |
---|
title | Detailed Description |
---|
| Detailed DescriptionThe original 26 cases referenced in this manuscript have been renamed. A list of the mapping between GSM-XXX Patient IDs and R01-XXX Patient IDs can be found here . |
Localtab |
---|
title | Citations & Data Usage Policy |
---|
| Citations & Data Usage Policy Public collection license |
---|
Info |
---|
| Napel, Sandy, & Plevritis, Sylvia K. (2014). NSCLC Radiogenomics: Initial Stanford Study of 26 Cases |
|
|
...
Metadata
...
Info |
---|
| Clark K, Vendt B, Smith K, Freymann J, Kirby J, Koppel P, Moore S, Phillips S, Maffitt D, Pringle M, Tarbox L, Prior F. The Cancer Imaging Archive (TCIA): Maintaining and Operating a Public Information Repository, Journal of Digital Imaging, Volume 26, Number 6, December, 2013, pp 1045-1057. (paper) |
In addition to the dataset citation above, please be sure to cite the following if you utilize these data in your research: Info |
---|
title | Publication Citation |
---|
| Gevaert, O., Xu, J., Hoang, C. D., Leung, A. N., Xu, Y., Quon, A., … Plevritis, S. K. (2012, August). Non–Small Cell Lung Cancer: Identifying Prognostic Imaging Biomarkers by Leveraging Public Gene Expression Microarray Data—Methods and Preliminary Results. Radiology. Radiological Society of North America (RSNA). http://doi.org/10.1148/radiol.12111607 |
Other Publications Using This Data TCIA maintains a list of publications that leverage TCIA data. If you have a manuscript you'd like to add please contact the TCIA Helpdesk. |
Localtab |
---|
| Version 1 (Current): 2013/03/01 Data Type | Download all or Query/Filter |
---|
Images (DICOM) | | Microarray Samples | |
|
|