Child pages
  • Low-Dose CT Images of Healthy Cohort (Healthy-Total-Body CTs)

You are viewing an old version of this page. View the current version.

Compare with Current View Page History

« Previous Version 5 Next »

Summary

This data set includes low-dose whole body CT images and tissue segmentations of thirty healthy adult research participants who underwent a PET/CT scan on the uEXPLORER total-body PET system at UC Davis. Participants included in this study were healthy adults 18 years of age or older who were able to provide informed written consent. The participants age, gender, weight, height, and body mass index are also provided.   

Fifteen participants underwent a CT scan at three different timepoints during a 3-hour period (0 minutes, 90 minutes, and 180 minutes), while the remaining 15 participants underwent six CT scans during a 12-hour period (additionally at 360 minutes, 540 minutes, and 720 minutes). The tissue segmentations include 37 tissues consisting of 13 abdominal organs, 20 different bones, subcutaneous and visceral fat, skeletal and psoas muscle.

The uEXPLORER CT scanner is an 80-row, 160 slice CT scanner typically used for anatomical imaging and attenuation correction for PET/CT imaging. The CT scan obtained at 90 minutes was performed with 140 kVp and an average of 50 mAs for all subjects while at all other time-points (0 minutes, 180 minutes, ect.) the CT scan was obtained with 140 kVp and average of 5 mAs. CT images were reconstructed into a 512x512x828 image matrix with 0.9766x0.9766x2.344 mm3 voxel size. It is planned to add the FDG PET dynamic total-body sequences in a future version update. 

This data is useful as a benchmark for evaluating normal physiological state, and comparing it to pathological states. Combined with other data sets, it can be used to evaluate the progress and impact of aging related diseases, cancer progression and response to treatment, and other conditions. It is unique in including healthy research participants, as well as for including full body images from the brain to the feet. It can also be used to train AI algorithms to enable automatic segmentation of the previously described tissues.


Acknowledgements

We would like to acknowledge the individuals and institutions that have provided data for this collection:

  • Funding for this work was provided by NIH grant R01 CA206187, which is supported by NCI, NIBIB and the Office of the Director, and by R01 CA249422.

Data Access

Some data in this collection contains images that could potentially be used to reconstruct a human face. To safeguard the privacy of participants, users must sign and submit a TCIA Restricted License Agreement to help@cancerimagingarchive.net before accessing the data.

This is a limited access data set. To request access please register an account on the NCTN Data Archive.  After logging in, use the "Request Data" link in the left side menu.  Follow the on screen instructions, and enter NCT00352534 when asked which trial you want to request.  In step 2 of the Create Request form, be sure to select “Imaging Data Requested”. Please contact NCINCTNDataArchive@mail.nih.gov for any questions about access requests.

Data TypeDownload all or Query/FilterLicense

Images, (DICOM, XX.X GB)


   

(Download requires NBIA Data Retriever)

Segmentations (NIfTI)


Clinical data (CSV)

Segmentation Organ values


Click the Versions tab for more info about data releases.


Detailed Description

Image Statistics

Radiology Image Statistics

Modalities

CT

Number of Patients

30

Number of Studies


Number of Series


Number of Images


Images Size (GB)



Citations & Data Usage Policy

Users must abide by the TCIA Data Usage Policy and Restrictions. Attribution should include references to the following citations:

Data Citation

DOI goes here. Create using Datacite with information from Collection Approval form

Publication Citation

We ask on the proposal form if they have ONE traditional publication they'd like users to cite.

Acknowledgement

Required acknowledgements only (ex:The CPTAC program requests that publications using data from this program...). If they just want to thank someone, that goes in the Acknowledgement section underneath the Summary.

TCIA Citation

Clark, K., Vendt, B., Smith, K., Freymann, J., Kirby, J., Koppel, P., Moore, S., Phillips, S., Maffitt, D., Pringle, M., Tarbox, L., & Prior, F. (2013). The Cancer Imaging Archive (TCIA): Maintaining and Operating a Public Information Repository. In Journal of Digital Imaging (Vol. 26, Issue 6, pp. 1045–1057). Springer Science and Business Media LLC. https://doi.org/10.1007/s10278-013-9622-7

Other Publications Using This Data

TCIA maintains a list of publications which leverage TCIA data. If you have a manuscript you'd like to add please contact the TCIA Helpdesk.

Version 1 (Current): Updated yyyy/mm/dd

Data TypeDownload all or Query/FilterLicense

Images

    (Download requires the NBIA Data Retriever)

Segmentations (NIfTI)


Clinical data (CSV)

Segmentation Organ values






  • No labels