Prostate-3T

Summary

Prostate transversal T2-weighted magnetic resonance images (MRIs) acquired on a 3.0T Siemens TrioTim using only a pelvic phased-array coil were acquired for prostate cancer detection. The data was provided to TCIA as part of an ISBI challenge competition in 2013.

Data Access

Data Type	Download all or Query/Filter	License
Images (DICOM, 284MB)	(Download requires the NBIA Data Retriever)	CC BY 3.0
Seminal vesicles (SV) and neurovascular bundle (NVB) Segmentations (MHA, zip)		CC BY 3.0
NCI ISBI Challenge - Segmentations of central gland and the peripheral zone ((NRRD, zip)		CC BY 3.0

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Additional Resources for this Dataset

The NCI Cancer Research Data Commons (CRDC) provides access to additional data and a cloud-based data science infrastructure that connects data sets with analytics tools to allow users to share, integrate, analyze, and visualize cancer research data.

Imaging Data Commons (IDC) (Imaging Data)

Third Party Analyses of this Dataset

TCIA encourages the community to publish your analyses of our datasets. Below is a list of such third party analyses published using this Collection:

NCI-ISBI 2013 Challenge: Automated Segmentation of Prostate Structures (ISBI-MR-Prostate-2013)

Detailed Description

Collection Statistics
Modalities	MR (T2W)
Number of Patients	64
Number of Studies	64
Number of Series	64
Number of Images	1,258
Image Size (MB)	284

Metadata

On some cases in this collection segmentations are available. The segmentations were constructed using MeVisLab (http://www.mevislab.de).

NCI_ISBI_Challenge-Prostate3T_Training_Segmentations.zip - Segmentations of central gland and the peripheral zone. More information about the nature of these segmentations can be found on the NCI-ISBI 2013 Challenge - Automated Segmentation of Prostate Structures page.
Prostate3T_Training_Segmentations.zip - Segmentations of the neurovascular bundle and seminal vessicles are available as MHA files. These were provided as part of a planned follow up competition that did not materialize.

Citations & Data Usage Policy

Users must abide by the TCIA Data Usage Policy and Restrictions. Attribution should include references to the following citations:

Data Citation

Litjens, Geert, Futterer, Jurgen, & Huisman, Henkjan. (2015). Data From Prostate-3T. The Cancer Imaging Archive. DOI: 10.7937/K9/TCIA.2015.QJTV5IL5

TCIA Citation

Clark K, Vendt B, Smith K, Freymann J, Kirby J, Koppel P, Moore S, Phillips S, Maffitt D, Pringle M, Tarbox L, Prior F. (2013) The Cancer Imaging Archive (TCIA): Maintaining and Operating a Public Information Repository, Journal of Digital Imaging, Volume 26, Number 6 pp 1045-1057. DOI: 10.1007/s10278-013-9622-7

Other Publications Using This Data

Bloch N, Rusu M, et al. (2015) NCI-ISBI 2013 Challenge: Automated Segmentation of Prostate Structures. TCIA. St. Louis, MO

TCIA maintains a list of publications that leverage our data. If you have a publication you'd like to add, please contact the TCIA Helpdesk.

Version 1 (Current): Updated 2013/05/31

Downloads require the NBIA Data Retriever.

Data Type	Download all or Query/Filter
Images (DICOM, 284MB)	(Download requires the NBIA Data Retriever)
NCI ISBI Challenge - Segmentations of central gland and the peripheral zone (zip)
Seminal vesicles (SV) and neurovascular bundle (NVB) Segmentations (zip)

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