Localtab |
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active | true |
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title | Data Access |
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| Data AccessData Type | Download all or Query/Filter |
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Images (DICOM, 139.4 GB) |
Tcia button generator |
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url | https://wiki.cancerimagingarchive.net/download/attachments/70225642/UPENN-GBM-manifest_20210923.tcia?api=v2 |
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label | Search |
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url | https://nbia.cancerimagingarchive.net/nbia-search/?MinNumberOfStudiesCriteria=1&CollectionCriteria=UPENN-GBM |
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(Download requires the NBIA Data Retriever) | Images (NIfTI, 69 GB) |
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url | https://faspex.cancerimagingarchive.net/aspera/faspex/external_deliveries/181?passcode=639c82e9a59d8f3b60dd1f039d68e7d09bf1b404 |
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| Clinical Data (CSV, 51 kB) |
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url | https://wiki.cancerimagingarchive.net/download/attachments/70225642/https://wiki.cancerimagingarchive.net/download/attachments/70225642/UPENN-GBM_clinical_info_v1.1.csv?api=v2https://wiki.cancerimagingarchive.net/download/attachments/70225642/UPENN-GBM_clinical_info_v1.0.csv?api=v2 |
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| Radiomic Data (ZIP, | Image acquisition parameters (CSV 195 kB) |
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url | https://wiki.cancerimagingarchive.net/download/attachments/70225642/UPENN-GBM_acquisition.csv?api=v2 |
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| Data availability per subject (126 kB) |
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url | https://wiki.cancerimagingarchive.net/download/attachments/70225642/UPENN-GBM_data_availability.csv?api=v2 |
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| CaPTk radiomic features list (6 kB | 15.37 MB) |
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url | https://wiki.cancerimagingarchive.net/download/attachments/70225642/UPENN-GBM_CaPTk_radiomic_features_list.csv?api=v2 |
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| CaPTk | .zipradiomic feature parameter file (4 kB) |
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url | https://wiki.cancerimagingarchive.net/download/attachments/70225642/UPENN-GBM_CaPTk_fe_params.csv?api=v2 |
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| Images Radiomic Data ( | NIfTI, 69 GB) ZIP,15.37 MB) | | ext | true | faspexwiki.cancerimagingarchive.net/download/ |
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| aspera | faspex | external_deliveries/181?passcode=639c82e9a59d8f3b60dd1f039d68e7d09bf1b404 radiomic_features_CaPTk.zip?api=v2 |
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Click the Versions tab for more info about data releases. Please contact help@cancerimagingarchive.net with any questions regarding usage. |
Localtab |
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title | Detailed Description |
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| Detailed DescriptionImage Statistics |
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Modalities | MR | Number of Patients | 630 | Number of Studies | 3,301 | Number of Series | 3,680 | Number of Images | 828,234 | Images Size (GB) | 139.4 |
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Localtab |
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title | Citations & Data Usage Policy |
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| Citations & Data Usage Policy Public collection license |
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Info |
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| Bakas, S., Sako, C., Akbari, H., Bilello, M., Sotiras, A., Shukla, G., Rudie, J. D., Flores Santamaria, N., Fathi Kazerooni, A., Pati, S., Rathore, S., Mamourian, E., Ha, S. M., Parker, W., Doshi, J., Baid, U., Bergman, M., Verma, R., Lustig, R., … Davatzikos, C. (2021). Multi-parametric magnetic resonance imaging (mpMRI) scans for de novo Glioblastoma (GBM) patients from the Hospital of the University of Pennsylvania [Data set]. The Cancer Imaging Archive. https://doi.org/10.7937/TCIA.709X-DN49 |
Info |
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title | Publication Citation |
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| Bakas, S., Sako, C., Akbari, H., Bilello, M., Sotiras, A., Shukla, G., Rudie, J. D., Flores Santamaria, N., Fathi Kazerooni, A., Pati, S., Rathore, S., Mamourian, E., Ha, S. M., Parker, W., Doshi, J., Baid, U., Bergman, M., Binder, Z. A., Verma, R., Lustig, R., Desai, A. S., Bagley, S. J., Mourelatos, Z., Morrissette, J., Watt, C. D., Brem, S., Wolf, R. L., Melhem, E. R., Nasrallah, M. P., Mohan, S., O’Rourke, D. M., Davatzikos, C. “The University of Pennsylvania glioblastoma (UPenn-GBM) cohort: advanced MRI, clinical, genomics, & radiomics”, Nature Scientific Data, [In Press], 2022 |
Info |
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| Clark, K., Vendt, B., Smith, K., Freymann, J., Kirby, J., Koppel, P., Moore, S., Phillips, S., Maffitt, D., Pringle, M., Tarbox, L., & Prior, F. (2013). The Cancer Imaging Archive (TCIA): Maintaining and Operating a Public Information Repository. Journal of Digital Imaging, 26(6), 1045–1057. https://doi.org/10.1007/s10278-013-9622-7 |
Other Publications Using This DataTCIA maintains a list of publications which leverage TCIA data. If you have a manuscript you'd like to add please contact the TCIA Helpdesk. |
Localtab |
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| Version 1 (Current): 2021/00/00Data Type | Download all or Query/Filter |
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Images (DICOM, 139.4 GB) |
Tcia button generator |
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url | https://wiki.cancerimagingarchive.net/download/attachments/70225642/UPENN-GBM-manifest_20210923.tcia?api=v2 |
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Tcia button generator |
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label | Search |
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url | https://nbia.cancerimagingarchive.net/nbia-search/?MinNumberOfStudiesCriteria=1&CollectionCriteria=UPENN-GBM |
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(Requires NBIA Data Retriever) | Images (NIfTI, 69 GB) |
Tcia button generator |
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url | https://faspex.cancerimagingarchive.net/aspera/faspex/external_deliveries/181?passcode=639c82e9a59d8f3b60dd1f039d68e7d09bf1b404 |
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| Clinical Data (CSV, 51 kB) |
Tcia button generator |
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url | https://wiki.cancerimagingarchive.net/download/attachments/70225642/UPENN-GBM_clinical_info_v1.1.csv?api=v2https://wiki.cancerimagingarchive.net/download/attachments/70225642/UPENN-GBM_clinical_info_v1.0.csv?api=v2 |
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| Image acquisition parameters (CSV 195 kB) |
Tcia button generator |
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url | https://wiki.cancerimagingarchive.net/download/attachments/70225642/UPENN-GBM_acquisition.csv?api=v2 |
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| Data availability per subject (126 kB) |
Tcia button generator |
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url | https://wiki.cancerimagingarchive.net/download/attachments/70225642/UPENN-GBM_data_availability.csv?api=v2 |
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| CaPTk radiomic features list (6 kB) |
Tcia button generator |
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url | https://wiki.cancerimagingarchive.net/download/attachments/70225642/UPENN-GBM_CaPTk_radiomic_features_list.csv?api=v2 |
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| CaPTk radiomic feature parameter file (4 kB) |
Tcia button generator |
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url | https://wiki.cancerimagingarchive.net/download/attachments/70225642/UPENN-GBM_CaPTk_fe_params.csv?api=v2 |
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| Radiomic Data (ZIP,15.37 MB) |
Tcia button generator |
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url | https://wiki.cancerimagingarchive.net/download/attachments/70225642/radiomic_features_CaPTk.zip?api=v2 |
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| Tcia button generator |
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ext | true |
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url | https://faspex.cancerimagingarchive.net/aspera/faspex/external_deliveries/181?passcode=639c82e9a59d8f3b60dd1f039d68e7d09bf1b404 |
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