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  • Multi-parametric magnetic resonance imaging (mpMRI) scans for de novo Glioblastoma (GBM) patients from the University of Pennsylvania Health System (UPENN-GBM)

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Localtab Group


Localtab
activetrue
titleData Access

Data Access

Data TypeDownload all or Query/Filter

Images (DICOM, 139.4 GB)


Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/70225642/UPENN-GBM-manifest_20210923.tcia?api=v2



Tcia button generator
labelSearch
urlhttps://nbia.cancerimagingarchive.net/nbia-search/?MinNumberOfStudiesCriteria=1&CollectionCriteria=UPENN-GBM



(Download requires the NBIA Data Retriever)

Images (NIfTI, 69 GB) 


Tcia button generator
urlhttps://faspex.cancerimagingarchive.net/aspera/faspex/external_deliveries/181?passcode=639c82e9a59d8f3b60dd1f039d68e7d09bf1b404



Clinical Data (CSV, 51 kB)


Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/70225642/https://wiki.cancerimagingarchive.net/download/attachments/70225642/UPENN-GBM_clinical_info_v1.1.csv?api=v2https://wiki.cancerimagingarchive.net/download/attachments/70225642/UPENN-GBM_clinical_info_v1.0.csv?api=v2



Image acquisition parameters (CSV 195 kB)


Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/70225642/UPENN-GBM_acquisition.csv?api=v2



Data availability per subject (126 kB)


Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/70225642/UPENN-GBM_data_availability.csv?api=v2



CaPTk radiomic features list (6 kB)


Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/70225642/UPENN-GBM_CaPTk_radiomic_features_list.csv?api=v2



CaPTk radiomic feature parameter file (4 kB)


Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/70225642/UPENN-GBM_CaPTk_fe_params.csv?api=v2



Radiomic Data (ZIP,15.37 MB)


Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/70225642/radiomic_features_CaPTk.zip?api=v2



Click the Versions tab for more info about data releases.

Please contact help@cancerimagingarchive.net  with any questions regarding usage.


Localtab
titleDetailed Description

Detailed Description

Image Statistics


Modalities

MR

Number of Patients

630

Number of Studies

3,301

Number of Series

3,680

Number of Images

828,234

Images Size (GB)139.4



Localtab
titleCitations & Data Usage Policy

Citations & Data Usage Policy

Public collection license

Info
titleData Citation

Bakas, S., Sako, C., Akbari, H., Bilello, M., Sotiras, A., Shukla, G., Rudie, J. D., Flores Santamaria, N., Fathi Kazerooni, A., Pati, S., Rathore, S., Mamourian, E., Ha, S. M., Parker, W., Doshi, J., Baid, U., Bergman, M., Binder, Z. A., Verma, R., Lustig, R., … Davatzikos, C. (2021). Multi-parametric magnetic resonance imaging (mpMRI) scans for de novo Glioblastoma (GBM) patients from the Hospital of the University of Pennsylvania [Data set]. The Cancer Imaging Archive. https://doi.org/10.7937/TCIA.709X-DN49


Info
titlePublication Citation

Bakas, S., Sako, C., Akbari, H., Bilello, M., Sotiras, A., Shukla, G., Rudie, J. D., Flores Santamaria, N., Fathi Kazerooni, A., Pati, S., Rathore, S., Mamourian, E., Ha, S. M., Parker, W., Doshi, J., Baid, U., Bergman, M., Binder, Z. A., Verma, R., Lustig, R., Desai, A. S., Bagley, S. J., Mourelatos, Z., Morrissette, J., Watt, C. D., Brem, S., Wolf, R. L., Melhem, E. R., Nasrallah, M. P., Mohan, S., O’Rourke, D. M., Davatzikos, C. “The University of Pennsylvania glioblastoma (UPenn-GBM) cohort: advanced MRI, clinical, genomics, & radiomics”, Nature Scientific Data, [In Press], 2022


Info
titleTCIA Citation

Clark, K., Vendt, B., Smith, K., Freymann, J., Kirby, J., Koppel, P., Moore, S., Phillips, S., Maffitt, D., Pringle, M., Tarbox, L., & Prior, F. (2013). The Cancer Imaging Archive (TCIA): Maintaining and Operating a Public Information Repository. Journal of Digital Imaging, 26(6), 1045–1057. https://doi.org/10.1007/s10278-013-9622-7

Other Publications Using This Data

TCIA maintains a list of publications which leverage TCIA data. If you have a manuscript you'd like to add please contact the TCIA Helpdesk.


Localtab
titleVersions

Version 1 (Current): 2021/00/00

Data TypeDownload all or Query/Filter
Images (DICOM, 139.4 GB)


Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/70225642/UPENN-GBM-manifest_20210923.tcia?api=v2



Tcia button generator
labelSearch
urlhttps://nbia.cancerimagingarchive.net/nbia-search/?MinNumberOfStudiesCriteria=1&CollectionCriteria=UPENN-GBM



(Requires NBIA Data Retriever)

Images (NIfTI, 69 GB) 


Tcia button generator
urlhttps://faspex.cancerimagingarchive.net/aspera/faspex/external_deliveries/181?passcode=639c82e9a59d8f3b60dd1f039d68e7d09bf1b404



Clinical Data (CSV, 51 kB)


Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/70225642/UPENN-GBM_clinical_info_v1.1.csv?api=v2https://wiki.cancerimagingarchive.net/download/attachments/70225642/UPENN-GBM_clinical_info_v1.0.csv?api=v2



Image acquisition parameters (CSV 195 kB)


Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/70225642/UPENN-GBM_acquisition.csv?api=v2



Data availability per subject (126 kB)


Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/70225642/UPENN-GBM_data_availability.csv?api=v2



CaPTk radiomic features list (6 kB)


Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/70225642/UPENN-GBM_CaPTk_radiomic_features_list.csv?api=v2



CaPTk radiomic feature parameter file (4 kB)


Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/70225642/UPENN-GBM_CaPTk_fe_params.csv?api=v2



Radiomic Data (ZIP,15.37 MB)


Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/70225642/radiomic_features_CaPTk.zip?api=v2





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