| Localtab |
|---|
| active | true |
|---|
| title | Data Access |
|---|
| Data Access| Data Type | Download all or Query/Filter | License |
|---|
Images (DICOM, 11.8 GB) |
| Tcia button generator |
|---|
| url | https://wiki.cancerimagingarchive.net/download/attachments/145752799/PDMR-Texture-Analysis.tcia?api=v2 |
|---|
|
|
| Tcia button generator |
|---|
| label | Search |
|---|
| url | https://nbia.cancerimagingarchive.net/nbia-search/?MinNumberOfStudiesCriteria=1&CollectionCriteria=PDMR-Texture-Analysis |
|---|
|
|
(Download requires NBIA Data Retriever) | | Standard Operating Procedure 50101: MRI T2 Weighted Non-Contrast Protocol Single Mouse Pulmonary Gated and Multi-Mouse Non-Gated (PDF, 141 KB) |
| Tcia button generator |
|---|
| url | https://wiki.cancerimagingarchive.net/download/attachments/145752799/SOP50101_MRI%20T2%20Weighted%20Non-Contrast%20Protocol_Single%20Mouse%20Pulmonary%20Gated%20and%20Multi-Mouse%20Non-Gated.pdf?api=v2 |
|---|
|
|
| | Standard Operating Procedure 50101: Tumor_Implantation_PDX (PDF, 328 KB) |
| Tcia button generator |
|---|
| url | https://wiki.cancerimagingarchive.net/download/attachments/145752799/SOP50101_Tumor_Implantation_PDX.pdf?api=v2 |
|---|
|
|
| | PDX Model Characterizations (XLSX, 27 KB) |
| Tcia button generator |
|---|
| url | https://wiki.cancerimagingarchive.net/download/attachments/145752799/PDX%20stats_V2.xlsx?api=v2 |
|---|
|
|
| | Data related to specific models in the collection at NCI Patient-Derived Models Repository PDMR (PDMRDOCX, 16 KB) |
| Tcia button generator |
|---|
| url | https://wiki.cancerimagingarchive.net/download/attachments/145752799/PDMR-LINKS%2020230607.docx?api=v2 |
|---|
|
|
| |
Click the Versions tab for more info about data releases. Additional Resources for this DatasetThe National Cancer Institute (NCI) has developed a national repository of Patient-Derived Models (PDMs) comprised of patient-derived xenografts (PDXs), in vitro patient-derived tumor cell cultures (PDCs) and cancer associated fibroblasts (CAFs) as well as patient-derived organoids (PDOrg). These models serve as a resource for public-private partnerships and for academic drug discovery efforts. These PDMs are clinically-annotated with molecular information and made available in the Patient-Derived Model Repository.
|
| Localtab |
|---|
| title | Detailed Description |
|---|
| Detailed DescriptionImage Statistics | Radiology Image Statistics |
|---|
Modalities | MR, SR | Number of Patients | 175 | Number of Studies | 689 | Number of Series | 1203 | Number of Images | 1934319,343 | | Images Size (GB) | 11.8 |
In addition to images, this collection includes Raw Data Storage SOP Class instances with MR Modality, generated by a Philips MR scanner; this data is not useful to anyone without the proprietary software to interpret it. |
| Localtab |
|---|
| title | Citations & Data Usage Policy |
|---|
| Citations & Data Usage Policy| Tcia limited license policy |
|---|
| Info |
|---|
| Kalen, J. D., Ileva, L. V., Riffle, L. A., Keita, S., Tatum, J. L., Jacobs, P. M., Sanders, C., James, A., Difilippantonio, S., Thang, L., Hollingshead, M. G., Evrard, Y., Clunie, D. A., Miao, T., Wagner, U., Freymann, J., Kirby, J., & Doroshow, J. H. (2023). Serial Non-contrast Non-gated T2w MRI Datasets of Patient Derived Xenograft Cancer Models for Development of Tissue Characterization Algorithms (PDMR-Texture Analysis) (Version 1) [Data set]. The Cancer Imaging Archive. https://doi.org/10.7937/3KQ0-YK19 |
| Info |
|---|
| Clark, K., Vendt, B., Smith, K., Freymann, J., Kirby, J., Koppel, P., Moore, S., Phillips, S., Maffitt, D., Pringle, M., Tarbox, L., & Prior, F. (2013). The Cancer Imaging Archive (TCIA): Maintaining and Operating a Public Information Repository. In Journal of Digital Imaging (Vol. 26, Issue 6, pp. 1045–1057). Springer Science and Business Media LLC.https://doi.org/10.1007/s10278-013-9622-7 |
Other Publications Using This DataTCIA maintains a list of publications which leverage TCIA data. If you have a manuscript you'd like to add please contact the TCIA Helpdesk. - Kalen, J. D., Clunie, D. A., Liu, Y., Tatum, J. L., Jacobs, P. M., Kirby, J., Freymann, J. B., Wagner, U., Smith, K. E., Suloway, C., & Doroshow, J. H. (2021). Design and Implementation of the Pre-Clinical DICOM Standard in Multi-Cohort Murine Studies. Tomography (Ann Arbor, Mich.), 7(1), 1–9. https://doi.org/10.3390/tomography7010001
|
| Localtab |
|---|
| Version 1 (Current): Updated 2023/06/14| Data Type | Download all or Query/Filter | License |
|---|
Images (DICOM, 11.8 GB) |
| Tcia button generator |
|---|
| url | https://wiki.cancerimagingarchive.net/download/attachments/145752799/PDMR-Texture-Analysis.tcia?api=v2 |
|---|
|
|
| Tcia button generator |
|---|
| label | Search |
|---|
| url | https://nbia.cancerimagingarchive.net/nbia-search/?MinNumberOfStudiesCriteria=1&CollectionCriteria=PDMR-Texture-Analysis |
|---|
|
|
(Download |
requires the | | Standard Operating Procedure 50101: MRI T2 Weighted Non-Contrast Protocol Single Mouse Pulmonary Gated and Multi-Mouse Non-Gated (PDF, 141 KB) |
| Tcia button generator |
|---|
| url | https://wiki.cancerimagingarchive.net/download/attachments/145752799/SOP50101_MRI%20T2%20Weighted%20Non-Contrast%20Protocol_Single%20Mouse%20Pulmonary%20Gated%20and%20Multi-Mouse%20Non-Gated.pdf?api=v2 |
|---|
|
|
| | Standard Operating Procedure 50101: Tumor_Implantation_PDX (PDF, 328 KB) |
| Tcia button generator |
|---|
| url | https://wiki.cancerimagingarchive.net/download/attachments/145752799/SOP50101_Tumor_Implantation_PDX.pdf?api=v2 |
|---|
|
|
| | PDX Model Characterizations (XLSX, 27 KB) |
| Tcia button generator |
|---|
| url | https://wiki.cancerimagingarchive.net/download/attachments/145752799/PDX%20stats_V2.xlsx?api=v2 |
|---|
|
|
| | Data related to specific models in the collection at NCI Patient-Derived Models Repository PDMR ( |
PDMRDOCX, 16 KB) |
| Tcia button generator |
|---|
| url | https://wiki.cancerimagingarchive.net/download/attachments/145752799/PDMR-LINKS%2020230607.docx?api=v2 |
|---|
|
|
| |
|
|