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Summary
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The Cancer Genome Atlas-Head-Neck Squamous Cell Carcinoma (TCGA-HNSC) data collection is part of a larger effort to enhance TCGA's data set with characterized radiological images. The Cancer Imaging Program (CIP) with the cooperation of several of the TCGA tissue-contributing institutions are working to archive a large portion of the radiological images of the genetically-analyzed HNSC cases. |
Clinical, genetic, and pathological data resides in the TCGA data portal, while the radiological data is stored on The Cancer Imaging Archive (TCIA). The data utilizes the same TCGA patient identifiers in both repositories, allowing researchers to explore the correlations between tissue genotype and radiological phenotype. This collection within TCIA is related to the HNSC disease type within TCGA.
CIP TCGA Radiology Initiative
The CIP has begun multiple projects to collaborate with the academic community to encourage cross disciplinary research, which utilizes the data provided in these resources. More can be learned about this effort on the TCGA Head-Neck Phenotype Research Group page.
Acknowledgements
We would like to acknowledge the individuals and institutions that have provided data for this collection:
- University of Pittsburgh/UPMC, Pittsburgh, PA - Special thanks to Margarita L Zuley, MD and Rose Jarosz.
- University of North Carolina, Chapel Hill, NC - Special thanks to J. Keith Smith, MD, Ph.D. and Shanah Kirk from the Department of Radiology.
- MD Anderson Cancer Center, Houston TX - Special thanks to Rivka Colen, MD and Kimberly Garcia.
- Vanderbilt University Medical Center, Nashville TN - Special thanks to Dominique Delbeke, MD, Ph.D. and Michelle Pham.
- Johns Hopkins University - Special thanks to Paul Nagy, PhD, FSIIM and Gorkem Sevinc
- University of Miami, Miller School of Medicine- Special thanks to Jose M. Net, MD
- Barretos Cancer Hospital, Barretos, São Paulo, Brazil – Special Thanks to Fabiano Rubião Lucchesi, MD and Natália Del Angelo Aredes.
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