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  • A Large-Scale CT and PET/CT Dataset for Lung Cancer Diagnosis (Lung-PET-CT-Dx)

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Summary

Excerpt

Our dataset consists of DICOM and XML Annotation files. The images were retrospectively acquired from patients with suspicion of lung caner, and who underwent standard-of-care lung biopsy and PET/CT. The cases were confirmed by pathological diagnosis.

The XML Annotation files, which are widely used in deep learning and machine learning research, were provided by five chest Radiologist and two deep learning researchers making our dataset a useful tool and resource for developing algorithms for medical diagnosis. The images were analyzed on the mediastinum (window width, 350 HU; level, 40 HU) and lung (window width, 1,400 HU; level, –700 HU) settings. The reconstructions were made in 2mm-slice-thick and lung settings. The CT slice interval varies from 0.625 mm to 5 mm. Scanning mode includes plain and contrast and 3D reconstruction.  The location of the tumors was labeled in the DICOM images, and the image annotations are saved in XML files in PASCAL VOC format. Users can parse the annotations using the PASCAL Development Toolkit:  https://pypi.org/project/pascal-voc-tools/

                                                                                                                                                                                                                                                                   

Acknowledgements

We would like to acknowledge the individuals and institutions that have provided data for this collection:

  • Drs. Huiping Han, Funing Yang and Rui Wang for their help collecting clinical data 

  • The Computer Center and Cancer Institute at the Second Affiliated Hospital of Harbin Medical University in Harbin, Heilongjiang Province, China for their help collecting the image data

  • Beijing Municipal Administration of Hospital Clinical Medicine Development of Special Funding (ZYLX201511)


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Localtab
activetrue
titleData Access

Data Access

Data TypeDownload all or Query/Filter
Images (DICOM, XX.X GB)

Image Modified

(Download requires the NBIA Data Retriever)

Annotation Files (XML) 14.62 (MB)

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Localtab
titleDetailed Description

Detailed Description

Image Statistics


Modalities

CT,PT

Number of Patients

363

Number of Studies

446

Number of Series

1208

Number of Images

21,3797

Images Size (GB)128.6

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Localtab
titleCitations & Data Usage Policy

Citations & Data Usage Policy

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These collections are freely available to browse, download, and use for commercial, scientific and educational purposes as outlined in the Creative Commons Attribution 4.0 International License. Questions may be directed to help@cancerimagingarchive.net. Please be sure to acknowledge both this data set and TCIA in publications by including the following citations in your work:

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titleData Citation

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titleTCIA Citation

Clark K, Vendt B, Smith K, Freymann J, Kirby J, Koppel P, Moore S, Phillips S, Maffitt D, Pringle M, Tarbox L, Prior F. The Cancer Imaging Archive (TCIA): Maintaining and Operating a Public Information Repository, Journal of Digital Imaging, Volume 26, Number 6, December, 2013, pp 1045-1057. DOI: 10.1007/s10278-013-9622-7


In addition to the dataset citations above, please be sure to cite the following if you utilize these data in your research:

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titleAcknowledgement


Other Publications Using This Data

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Localtab
titleVersions

Version 1 (Current): Updated yyyy/mm/dd

Data TypeDownload all or Query/Filter
Images (DICOM, xx.x GB)
Annotation Files (XML) 14.62 (MB)

Clinical Data (CSV)Link
Other (format)



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