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This page describes the TCGA Renal -KIRC Phenotype Research Group research project aimed at developing and testing their newly developed Renal Feature Key for correlative analysis with the other TCGA data types (genetics, pathology, clinical).
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This is the latest progress on the TCGA-KIRC cases. Instructions for readers who are being actively assigned cases can be found on the TCGA Research on the Cloud wiki page. Instructions for using Clearcanvas to view and score the cases can be found in the How To Guide - Reading Renal Cases with Clearcanvas. Instructions for those who wish to replicate this project independently can be found on Renal Group Reader Training page.
Completed - Reader has finished reading the case for Tumor features and submitted their AIM characterizations to the AIM data service
Completed (E) - Reader has finished reading the case for Tumor + Enhancement features and submitted their AIM characterizations to the AIM data service
Completed (E) - Reader has completed the Tumor features, but has now been instructed to review this case for Enhancement features
In Progress (E) - Reader has been instructed to review this case for Tumor + Enhancement features, but has not yet completed it
In Progress - Reader has been instructed to review this case for Tumor features, but has not yet completed it
Unassigned - Reader has not yet been asked to review this case
Round
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4 - Updated
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5/
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6/14
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sortColumn | 1 |
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autoNumber | false |
Batch | Case | oakin |
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sprasad
rvikram | mheller | aoto |
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vkatabathina |
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nsainani |
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ashinagare | vsurabhi | tbathala |
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07 | TCGA-BP- |
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5189 | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | In Progress |
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In Progress |
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Completed | |||||||
07 | TCGA-BP-5190 | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
...
1
Unassigned | Unassigned | Completed |
07 | TCGA |
...
-BP- |
...
In Progress (E)
...
In Progress
5191 | Unassigned | Unassigned | Unassigned |
...
Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
...
Completed |
...
07 | TCGA-BP- |
...
In Progress (E)
...
In Progress
5192 | Unassigned | Unassigned | Unassigned |
...
Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
...
Completed |
...
07 | TCGA-BP- |
...
In Progress (E)
...
In Progress
5194 | Unassigned | Unassigned | Unassigned |
...
Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
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Completed |
...
07 | TCGA-BP- |
...
In Progress (E)
...
In Progress
5195 | Unassigned | Unassigned | Unassigned |
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Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
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Completed |
...
07 | TCGA-BP- |
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5196 |
...
In Progress
...
In Progress (E)
Unassigned | Unassigned | Unassigned |
...
Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
...
Completed |
...
07 | TCGA-BP- |
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5198 |
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In Progress
...
In Progress (E)
Unassigned | Unassigned | Unassigned |
...
Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
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Completed |
...
07 | TCGA-BP- |
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5199 |
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In Progress
...
In Progress (E)
Unassigned | Unassigned | Unassigned |
...
Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
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Completed |
...
07 | TCGA-BP- |
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5200 |
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In Progress
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In Progress (E)
Unassigned | Unassigned | Unassigned |
...
Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
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Completed |
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07 | TCGA-BP- |
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5201 |
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In Progress
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In Progress (E)
Unassigned | Unassigned | Unassigned |
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Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
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Completed |
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07 | TCGA-BP- |
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5202 |
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Unassigned |
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In Progress
Unassigned | Unassigned |
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Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
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Completed |
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07 | TCGA- |
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B0- |
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In Progress
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In Progress
4698 | Unassigned | Unassigned | Unassigned | Unassigned |
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Unassigned | Unassigned | Unassigned | Unassigned |
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Completed |
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Unassigned
07 | TCGA- |
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B0- |
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4712 |
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Unassigned |
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In Progress
Unassigned | Unassigned |
...
Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
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Completed |
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07 | TCGA- |
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B0- |
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4713 |
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Unassigned |
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In Progress
Unassigned | Unassigned |
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Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
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Completed |
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08 | TCGA- |
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B0-4821 | Unassigned | Unassigned | Unassigned | In Progress | In Progress | In Progress |
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Unassigned | Unassigned | Unassigned |
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Unassigned
...
Unassigned
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Unassigned
08 | TCGA-B0-4833 |
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2
...
Unassigned | Unassigned | Unassigned |
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In Progress (E)
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Completed
Unassigned | Unassigned | Unassigned |
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Unassigned | Unassigned | Unassigned |
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08 | TCGA- |
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B0- |
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4839 | Unassigned | Unassigned | Unassigned |
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In Progress (E)
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Completed
Unassigned | Unassigned | Unassigned |
...
Unassigned | Unassigned | Unassigned |
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08 | TCGA- |
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B0- |
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4843 | Unassigned | Unassigned | Unassigned |
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In Progress (E)
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Completed
Unassigned | Unassigned | Unassigned |
...
Unassigned | Unassigned | Unassigned |
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08 | TCGA- |
...
B0- |
...
4845 | Unassigned | Unassigned | Unassigned |
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In Progress (E)
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Completed
Unassigned | Unassigned | Unassigned |
...
Unassigned | Unassigned | Unassigned |
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08 | TCGA- |
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B0- |
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4849 | Unassigned | Unassigned | Unassigned |
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In Progress (E)
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Completed
Unassigned | Unassigned | Unassigned |
...
Unassigned | Unassigned | Unassigned |
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08 | TCGA- |
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B0- |
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5077 | Unassigned | Unassigned | Unassigned |
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In Progress
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Completed (E)
Unassigned | Unassigned | Unassigned |
...
Unassigned | Unassigned | Unassigned |
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08 | TCGA- |
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B0- |
...
5081 | Unassigned | Unassigned | Unassigned |
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In Progress
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Completed (E)
Unassigned | Unassigned | Unassigned |
...
Unassigned | Unassigned | Unassigned |
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08 | TCGA- |
...
B0- |
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5085 | Unassigned | Unassigned | Unassigned | Unassigned |
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In Progress
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Completed (E)
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In Progress
Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
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08 | TCGA- |
...
B0- |
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5088 | Unassigned | Unassigned | Unassigned |
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In Progress
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Completed (E)
Unassigned | Unassigned | Unassigned |
...
Unassigned | Unassigned | Unassigned |
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08 | TCGA- |
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B0- |
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5097 | Unassigned | Unassigned | Unassigned |
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In Progress
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Completed (E)
Unassigned | Unassigned | Unassigned |
...
Unassigned | Unassigned | Unassigned |
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08 | TCGA- |
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B0- |
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5099 | Unassigned | Unassigned | Unassigned |
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Unassigned |
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Completed
Unassigned | Unassigned |
...
Unassigned | Unassigned | Unassigned |
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08 | TCGA- |
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B0- |
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5106 | Unassigned | Unassigned | Unassigned |
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Unassigned |
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Completed
Unassigned | Unassigned |
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Unassigned | Unassigned | Unassigned |
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08 | TCGA- |
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B0- |
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5109 | Unassigned | Unassigned | Unassigned |
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Unassigned |
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Completed
Unassigned | Unassigned |
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Unassigned | Unassigned | Unassigned |
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08 | TCGA- |
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B0- |
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5110 | Unassigned | Unassigned | Unassigned |
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Unassigned |
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Completed
Unassigned | Unassigned |
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Unassigned | Unassigned | Unassigned |
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09 | TCGA- |
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B0- |
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Unassigned
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Unassigned
5115 | In Progress |
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In Progress |
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Completed
In Progress |
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Unassigned | Unassigned | Unassigned |
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TCGA-BP-4770
Unassigned | Unassigned | Unassigned |
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Unassigned
09 | TCGA-B0-5117 | Unassigned | Unassigned | Unassigned |
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In Progress (E)
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In Progress
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In Progress
Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
09 |
...
TCGA- |
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B0- |
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5121 | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
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In Progress (E)
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In Progress
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In Progress
Unassigned | Unassigned | Unassigned |
09 |
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TCGA- |
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B0- |
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5399 | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
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In Progress (E)
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In Progress
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In Progress
Unassigned | Unassigned | Unassigned |
09 |
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TCGA- |
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B0- |
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5696 | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
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In Progress (E)
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In Progress
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In Progress
Unassigned | Unassigned | Unassigned |
09 |
...
TCGA- |
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B0- |
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5697 | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
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In Progress (E)
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In Progress
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In Progress
Unassigned | Unassigned | Unassigned |
09 |
...
TCGA- |
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B0- |
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5698 | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
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In Progress
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In Progress (E)
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In Progress
Unassigned | Unassigned | Unassigned |
09 |
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TCGA- |
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B0- |
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5702 | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
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In Progress
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In Progress (E)
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In Progress
Unassigned | Unassigned | Unassigned |
09 |
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TCGA- |
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B0- |
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5703 | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
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In Progress
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In Progress (E)
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In Progress
Unassigned | Unassigned | Unassigned |
09 |
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TCGA- |
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B0- |
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5706 | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
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In Progress
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In Progress (E)
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In Progress
Unassigned | Unassigned | Unassigned |
09 |
...
TCGA- |
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B0- |
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5707 | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
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In Progress
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In Progress (E)
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In Progress
Unassigned | Unassigned | Unassigned |
09 |
...
TCGA- |
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B0- |
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5709 | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
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3
Unassigned |
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In Progress
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In Progress (E)
Unassigned |
09 |
TCGA- |
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B0- |
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5711 | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
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Unassigned |
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In Progress
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In Progress (E)
Unassigned | Unassigned |
09 |
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TCGA- |
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B0- |
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5712 | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
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Unassigned |
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In Progress
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In Progress (E)
Unassigned | Unassigned |
09 |
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TCGA- |
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B0- |
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5812 | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
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Unassigned |
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In Progress
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In Progress (E)
Unassigned | Unassigned |
10 |
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TCGA- |
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4
CW-5580 | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | In Progress |
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In Progress
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In Progress (E)
10 |
TCGA- |
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CW- |
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5581 | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
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10 | TCGA- |
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CW- |
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5583 | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
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10 | TCGA- |
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CW- |
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5584 | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
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10 | TCGA- |
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CW- |
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5585 | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
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10 | TCGA- |
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CW- |
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5587 | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
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10 | TCGA- |
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CW- |
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5588 | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
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10 | TCGA- |
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CW- |
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5589 | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
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10 | TCGA- |
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CW- |
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5590 | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
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10 | TCGA- |
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CW- |
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5591 | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
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10 | TCGA- |
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CW- |
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6087 | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
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10 | TCGA- |
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CW- |
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6088 | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
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10 | TCGA- |
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CW- |
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6090 | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
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4
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TCGA-BP-4973
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Unassigned
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Unassigned
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Unassigned
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Unassigned
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Unassigned
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Unassigned
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Unassigned
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Unassigned
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Unassigned
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4
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TCGA-BP-4975
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Unassigned
Round 3 - (round 1 re-reads) completed 2/24/14
Round 2 - Updated 8/8/13
Advanced Tables - Table Plus | |||||||||||||||||
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Unassigned
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Unassigned
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Unassigned
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Unassigned
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Unassigned
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Unassigned
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Unassigned
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Unassigned
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Unassigned
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Unassigned
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Unassigned
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Unassigned
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Unassigned
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Unassigned
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Unassigned
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Unassigned
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Unassigned
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Unassigned
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Unassigned
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Unassigned
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Unassigned
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Unassigned
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Unassigned
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Unassigned
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Unassigned
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Unassigned
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Unassigned
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Unassigned
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Unassigned
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Unassigned
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Unassigned
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Reported issues:
9/14/12 - Aytek reports CT of BP4351 is very limited. Does not cover the mass completely and it is non-contrast so I will not fill the form out for that case.
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Round 1 - Updated 2/8/13
Advanced Tables - Table Plus | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Reported issues:
9/14/12 - Aytek reports CT of BP4351 is very limited. Does not cover the mass completely and it is non-contrast so I will not fill the form out for that case.
9/19/12 - Aytek reports on TCGA-BP-4355 there are only a few images in the excretory phase and none are through the kidney, therefore, he cannot make enhancement measurements for the excretory phase.
9/21/12 - Chris reports Case TCGA BP 4799 contains a chest CT that cannot be evaluated. (MR was scored)
Training Cases - Updated 1/7/13
Case | oakin | sprasad | rvikram | mheller | aoto | hvargas | ckarlo | vkatabathina | vsurabhi |
KI-01-0001 | Completed (E) In Progress (E) | Completed | Unassigned | Completed (E) | Completed (E) | Completed (E) | Completed (E) In Progress (E) | Completed | Completed (E) |
KI-01-0002 | Completed (E) | Unassigned | Completed (E) | Completed (E) | Unassigned | Unassigned | Completed (E) | Unassigned | Completed (E) |
KI-01-0003 | Unassigned | Unassigned | Completed (E) | Completed (E) | Unassigned | Unassigned | Completed (E) | Unassigned | Completed (E) |
KI-01-0004 | Unassigned | Unassigned | Unassigned | Completed (E) | Unassigned | Unassigned | Completed (E) | Unassigned | Unassigned |
KI-02-0001 | Unassigned | In Progress (E) Completed | Unassigned | Completed (E) | Completed (E) | Completed (E) | Completed (E) In Progress (E) | Completed | Unassigned |
KI-02-0002 | Unassigned | Unassigned | Unassigned | Completed (E) | Unassigned | Unassigned | Completed (E) | Unassigned | Unassigned |
KI-02-0003 | Unassigned | Unassigned | Unassigned | Completed (E) | Unassigned | Unassigned | Completed (E) | Unassigned | Unassigned |
KI-02-0004 | Unassigned | Unassigned | Unassigned | Completed (E) | Unassigned | Unassigned | Completed (E) | Unassigned | Unassigned |
ClearCanvas sign-on
Name | User name | Role In Clinical Trial | Number within role in clinical trial |
Oguz Akin | oakin | Performing | 1 |
Srinivasa Prasad | sprasad | Performing | 2 |
Raghu Vikram | rvikram | Performing | 3 |
Matthew Heller | mheller | Performing | 4 |
Aytekin Oto | aoto | Performing | 5 |
Hebert Vargas | hvargas | Performing | 6 |
Christoph Karlo | ckarlo | Performing | 7 |
Venkata Katabathina | vkatabathina | Performing | 8 |
Venkateswar Surabhi | vsurabhi | Performing | 9 |
Alessandro Furlan | afurlan | Performing | 10 |
Nisha Sainani | nsainani | Performing | 11 |
Atul Shinagare | ashinagare | Performing | 12 |
Tarak Bathala | tbathala | Performing | 13 |