Summary
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location | https://www.cancerimagingarchive.net/collection/mimm_sbilab/ |
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Microscopic images were captured from bone marrow aspirate slides of patients diagnosed with multiple myeloma as per the standard guidelines. Slides were stained using Jenner- Giemsa stain. Images were captured at 1000x |
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magnification using Nikon Eclipse-200 microscope equipped with a digital camera. Images were captured in raw BMP format with a size of 2560x1920 pixels. In all, this dataset consists of 85 images. All these 85 images were stain normalized using our in-house methodology before being used for segmentation. These stain normalized images have been provided as the annotated dataset with plasma cells marked in all image slides contained in a presentation for the ready reference of readers. |
Additional Notes
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This collection has also been uploaded to the Harvard Blood Cancer Dataverse website. Please refer to DOI 10.7910/DVN/XCX7ST for more information.
Additional Publications using this dataset:
- Ritu Gupta, Pramit Mallick, Rahul Duggal, Anubha Gupta, and Ojaswa Sharma, "Stain Color Normalization and Segmentation of Plasma Cells in Microscopic Images as a Prelude to Development of Computer Assisted Automated Disease Diagnostic Tool in Multiple Myeloma," 16th International Myeloma Workshop (IMW), India, March 2017 https://doi.org/10.1016/j.clml.2017.03.178
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active | true |
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title | Data Access |
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| Data Access |
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Click the Download button to browse and download the data from Box.
Data Type | Download all or Query/Filter | License |
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Slide Images (BMP, |
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url | https://faspex.cancerimagingarchive.net/aspera/faspex?context=eyJyZXNvdXJjZSI6InBhY2thZ2VzIiwidHlwZSI6ImV4dGVybmFsX2Rvd25sb2FkX3BhY2thZ2UiLCJpZCI6IjUyOCIsInBhc3Njb2RlIjoiNzYxYjNhOWFjNDgyOWM0NDQ0NTFhYTU2NjVlM2Y1NjUwYjM5NDRkMCIsInBhY2thZ2VfaWQiOiI1MjgiLCJlbWFpbCI6ImhlbHBAY2FuY2VyaW1hZ2luZ2FyY2hpdmUubmV0In0= |
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label | Search |
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url | https://pathdb.cancerimagingarchive.net/imagesearch?f[0]=collection:mimm_sbilab |
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(Download and apply the IBM-Aspera-Connect plugin to your browser to retrieve this faspex package) | | Annotated plasma cell images (PDF, 12.67 MB) |
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Click the Versions tab for more info about data releases.
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url | https://wiki.cancerimagingarchive.net/download/attachments/52756988/Annotated_PPT_MM_Data.pdf?version=1&modificationDate=1615575877898&api=v2 |
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title | Detailed Description |
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Modalities | Pathology | Number of | |
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Participants | 5 | Number of Studies | 5 | Number of Images | 85 | Images Size (GB) | 1.27 |
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title | Citations & Data Usage Policy |
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| Citations & Data Usage Policy |
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Tcia limited license policy |
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title | Publication Citation |
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A., Duggal, R., Gehlot, S., Gupta, R., Mangal, A., Kumar, L., Thakkar, N., & Satpathy, D. (2020). GCTI-SN: Geometry- |
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title | Publication Citation |
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| Gupta, A., Mallick, P., Sharma, O., Gupta, R., & Duggal, R. (2018). PCSeg: Color model driven probabilistic multiphase level set based tool for plasma cell segmentation in multiple myeloma. PLOS ONE, 13(12), e0207908. https://doi.org/10.1371/journal.pone.0207908 |
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Info |
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| Clark, K., Vendt, B., Smith, K., Freymann, J., Kirby, J., Koppel, P., Moore, S., Phillips, S., Maffitt, D., Pringle, M., Tarbox, L., & Prior, F. |
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(2013). The Cancer Imaging Archive (TCIA): Maintaining and Operating a Public Information Repository |
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. Journal of Digital Imaging, |
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Other Publications Using This DataTCIA maintains a list of publications which leverage TCIA data. If you have a manuscript you'd like to add please contact |
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Localtab |
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| Version 1 (Current): Updated 2019/03/25
Data Type | Download all or Query/Filter |
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Images (BMP | |
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url | https://faspex.cancerimagingarchive.net/aspera/faspex?context=eyJyZXNvdXJjZSI6InBhY2thZ2VzIiwidHlwZSI6ImV4dGVybmFsX2Rvd25sb2FkX3BhY2thZ2UiLCJpZCI6IjUyOCIsInBhc3Njb2RlIjoiNzYxYjNhOWFjNDgyOWM0NDQ0NTFhYTU2NjVlM2Y1NjUwYjM5NDRkMCIsInBhY2thZ2VfaWQiOiI1MjgiLCJlbWFpbCI6ImhlbHBAY2FuY2VyaW1hZ2luZ2FyY2hpdmUubmV0In0= |
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label | Search |
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url | https://pathdb.cancerimagingarchive.net/imagesearch?f[0]=collection:mimm_sbilab |
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(Download and apply the IBM-Aspera-Connect plugin to your browser to retrieve this faspex package) | Annotated plasma cell images (PDF) | Tcia button generator |
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url | https://wiki.cancerimagingarchive.net/download/attachments/52756988/Annotated_PPT_MM_Data.pdf?version=1&modificationDate=1615575877898&api=v2 |
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