...
This page describes the TCGA Renal -KIRC Phenotype Research Group research project aimed at developing and testing their newly developed Renal Feature Key for correlative analysis with the other TCGA data types (genetics, pathology, clinical).
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This is the latest progress on the TCGA-KIRC cases. Instructions for readers who are being actively assigned cases can be found on the TCGA Research on the Cloud wiki page. Instructions for using Clearcanvas to view and score the cases can be found in the How To Guide - Reading Renal Cases with Clearcanvas. Instructions for those who wish to replicate this project independently can be found on Renal Group Reader Training page.
Completed - Reader has finished reading the case for Tumor features and submitted their AIM characterizations to the AIM data service
Completed (E) - Reader has finished reading the case for Tumor + Enhancement features and submitted their AIM characterizations to the AIM data service
Completed (E) - Reader has completed the Tumor features, but has now been instructed to review this case for Enhancement features
In Progress (E) - Reader has been instructed to review this case for Tumor + Enhancement features, but has not yet completed it
In Progress - Reader has been instructed to review this case for Tumor features, but has not yet completed it
Unassigned - Reader has not yet been asked to review this case
Round
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4 - Updated
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5/
...
6/14
...
| sortColumn | 1 |
|---|---|
| autoNumber | false |
Batch | Case | oakin |
|---|
...
sprasad
rvikram | mheller | aoto |
|---|
...
vkatabathina |
|---|
...
nsainani |
|---|
...
ashinagare | vsurabhi | tbathala |
|---|
...
07 | TCGA-BP- |
...
Completed (E)
...
In Progress
5189 | Unassigned | Unassigned | Unassigned |
...
Unassigned | Unassigned | Unassigned |
...
In Progress |
...
In Progress |
...
Completed |
...
07 | TCGA-BP- |
...
Completed (E)
...
In Progress
5190 | Unassigned | Unassigned | Unassigned |
...
Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
...
Completed |
...
07 | TCGA-BP- |
...
Completed (E)
...
In Progress
5191 | Unassigned | Unassigned | Unassigned |
...
Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
...
Completed |
...
07 | TCGA-BP- |
...
Completed (E)
...
In Progress
5192 | Unassigned | Unassigned | Unassigned |
...
Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
...
Completed |
...
07 | TCGA-BP- |
...
Completed (E)
...
In Progress
5194 | Unassigned | Unassigned | Unassigned |
...
Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
...
Completed |
...
07 | TCGA-BP- |
...
5195 |
...
Completed
...
In Progress (E)
Unassigned | Unassigned |
...
Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
...
Completed | |
07 | TCGA-BP- |
...
5196 |
...
Completed
...
In Progress (E)
Unassigned | Unassigned | Unassigned |
...
Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
...
Completed |
...
07 | TCGA-BP- |
...
5198 |
...
Completed
...
In Progress (E)
Unassigned | Unassigned | Unassigned |
...
Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
...
Completed |
...
07 | TCGA-BP- |
...
5199 |
...
Completed
...
In Progress (E)
Unassigned | Unassigned | Unassigned |
...
Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
...
Completed |
...
07 | TCGA-BP- |
...
5200 |
...
Completed
...
In Progress (E)
Unassigned | Unassigned | Unassigned |
...
Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
...
Completed |
...
07 | TCGA-BP- |
...
5201 |
...
Unassigned |
...
In Progress
Unassigned | Unassigned |
...
Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
...
Completed |
...
07 | TCGA-BP- |
...
5202 |
...
Unassigned |
...
In Progress
Unassigned | Unassigned |
...
Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
...
Completed |
...
07 | TCGA- |
...
B0- |
...
4698 |
...
Unassigned |
...
In Progress
Unassigned | Unassigned |
...
Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
...
Completed |
...
07 | TCGA- |
...
B0- |
...
4712 |
...
Unassigned |
...
In Progress
Unassigned | Unassigned |
...
Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
...
Completed |
...
07 | TCGA- |
...
B0- |
...
4713 |
...
Unassigned |
...
In Progress
Unassigned | Unassigned |
...
Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
...
Completed |
...
08 | TCGA- |
...
B0- |
...
4821 | Unassigned | Unassigned | Unassigned |
...
Completed (E)
...
Completed
In Progress | In Progress | In Progress |
...
Unassigned | Unassigned | Unassigned |
...
08 | TCGA- |
...
B0- |
...
4833 | Unassigned | Unassigned | Unassigned |
...
Completed (E)
...
Completed
Unassigned | Unassigned | Unassigned |
...
Unassigned | Unassigned | Unassigned |
...
08 | TCGA- |
...
B0- |
...
4839 | Unassigned | Unassigned | Unassigned |
...
Completed (E)
...
Completed
Unassigned | Unassigned | Unassigned |
...
Unassigned | Unassigned | Unassigned |
...
08 | TCGA- |
...
B0- |
...
4843 | Unassigned | Unassigned | Unassigned |
...
Completed (E)
...
Completed
Unassigned | Unassigned | Unassigned |
...
Unassigned | Unassigned | Unassigned |
...
08 | TCGA- |
...
B0- |
...
4845 | Unassigned | Unassigned | Unassigned |
...
Completed (E)
...
Completed
Unassigned | Unassigned | Unassigned |
...
Unassigned | Unassigned | Unassigned |
...
08 | TCGA- |
...
B0- |
...
4849 | Unassigned | Unassigned | Unassigned |
...
Completed
...
Completed (E)
Unassigned | Unassigned | Unassigned |
...
Unassigned | Unassigned | Unassigned |
...
08 | TCGA- |
...
B0- |
...
5077 | Unassigned | Unassigned | Unassigned |
...
Completed
...
Completed (E)
Unassigned | Unassigned | Unassigned |
...
Unassigned | Unassigned | Unassigned |
...
08 | TCGA- |
...
B0- |
...
5081 | Unassigned | Unassigned | Unassigned |
...
Completed
...
Completed (E)
Unassigned | Unassigned | Unassigned |
...
Unassigned | Unassigned | Unassigned |
...
08 | TCGA- |
...
B0- |
...
5085 | Unassigned | Unassigned | Unassigned |
...
Completed
...
Completed (E)
Unassigned | Unassigned | Unassigned |
...
Unassigned | Unassigned | Unassigned |
...
08 | TCGA- |
...
B0- |
...
5088 | Unassigned | Unassigned | Unassigned |
...
Completed
...
Completed (E)
Unassigned | Unassigned | Unassigned |
...
Unassigned | Unassigned | Unassigned |
...
08 | TCGA- |
...
B0- |
...
5097 | Unassigned | Unassigned | Unassigned |
...
Unassigned |
...
Completed
Unassigned | Unassigned |
...
Unassigned | Unassigned | Unassigned |
...
08 | TCGA- |
...
B0- |
...
5099 | Unassigned | Unassigned | Unassigned |
...
Unassigned |
...
Completed
Unassigned | Unassigned |
...
Unassigned | Unassigned | Unassigned |
...
08 | TCGA- |
...
B0- |
...
5106 | Unassigned | Unassigned | Unassigned |
...
Unassigned |
...
Completed
Unassigned | Unassigned |
...
Unassigned | Unassigned | Unassigned |
...
08 | TCGA- |
...
B0- |
...
5109 | Unassigned | Unassigned | Unassigned |
...
Unassigned |
...
Completed
Unassigned | Unassigned |
...
Unassigned | Unassigned | Unassigned |
...
08 | TCGA- |
...
B0- |
...
5110 | Unassigned | Unassigned | Unassigned |
...
Unassigned |
...
Completed
Unassigned | Unassigned |
...
Unassigned | Unassigned | Unassigned |
...
09 | TCGA- |
...
3
B0-5115 | In Progress | In Progress | In Progress | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
...
Completed (E)
...
In Progress
...
Completed
09 |
TCGA- |
...
B0- |
...
5117 | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
...
Completed (E)
...
In Progress
...
Completed
Unassigned | Unassigned | Unassigned |
09 |
...
TCGA- |
...
B0- |
...
5121 | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
...
Completed (E)
...
In Progress
...
Completed
Unassigned | Unassigned | Unassigned |
09 |
...
TCGA- |
...
B0- |
...
5399 | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
...
Completed (E)
...
In Progress
...
Completed
Unassigned | Unassigned | Unassigned |
09 |
...
TCGA- |
...
B0- |
...
5696 | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
...
Completed (E)
...
In Progress
...
Completed
Unassigned | Unassigned | Unassigned |
09 |
...
TCGA- |
...
B0- |
...
5697 | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
...
Completed
...
In Progress (E)
...
Completed
Unassigned | Unassigned | Unassigned |
09 |
...
TCGA- |
...
B0- |
...
5698 | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
...
Completed
...
In Progress (E)
...
Completed
Unassigned | Unassigned | Unassigned |
09 |
...
TCGA- |
...
B0- |
...
5702 | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
...
Completed
...
In Progress (E)
...
Completed
Unassigned | Unassigned | Unassigned |
09 |
...
TCGA- |
...
B0- |
...
5703 | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
...
Completed
...
In Progress (E)
...
Completed
Unassigned | Unassigned | Unassigned |
09 |
...
TCGA- |
...
B0- |
...
5706 | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
...
Completed
...
In Progress (E)
...
Completed
Unassigned | Unassigned |
09 |
...
TCGA- |
...
B0- |
...
5707 | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
...
Unassigned |
...
In Progress
...
In Progress (E)
Unassigned | Unassigned |
09 |
...
TCGA- |
...
B0- |
...
5709 | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
...
Unassigned |
...
In Progress
...
In Progress (E)
Unassigned | Unassigned |
09 |
...
TCGA- |
...
B0- |
...
5711 | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
...
Unassigned |
...
In Progress
...
In Progress (E)
Unassigned | Unassigned |
09 |
...
TCGA- |
...
B0- |
...
5712 | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
...
Unassigned |
...
In Progress
...
In Progress (E)
Unassigned | Unassigned |
09 |
...
TCGA- |
...
B0- |
...
5812 | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
...
Unassigned |
...
In Progress
...
In Progress (E)
Unassigned | Unassigned |
10 |
...
TCGA- |
...
CW- |
...
5580 | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
...
In Progress |
...
10 | TCGA- |
...
CW- |
...
5581 | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
...
10 | TCGA- |
...
CW- |
...
5583 | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
...
10 | TCGA- |
...
CW- |
...
5584 | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
...
10 | TCGA- |
...
CW- |
...
5585 | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
...
10 | TCGA- |
...
CW- |
...
5587 | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
...
10 | TCGA- |
...
CW- |
...
5588 | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
...
10 | TCGA- |
...
CW- |
...
5589 | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
...
10 | TCGA- |
...
CW- |
...
5590 | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
...
10 | TCGA- |
...
CW- |
...
5591 | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
...
10 | TCGA- |
...
CW- |
...
6087 | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
...
10 | TCGA- |
...
CW- |
...
6088 | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
...
10 | TCGA- |
...
CW- |
...
6090 | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned | Unassigned |
...
4
...
TCGA-BP-4975
...
Unassigned
Round 3 - (round 1 re-reads) completed 2/24/14
Round 2 - Updated 8/8/13
| Advanced Tables - Table Plus | |||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| |||||||||||||||||
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Unassigned
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Unassigned
|
Round 1 - Updated 2/8/13
| Advanced Tables - Table Plus | ||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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...
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Unassigned
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Unassigned
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...
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...
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...
Unassigned
...
Unassigned
|
...
|
...
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...
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...
Unassigned
...
Unassigned
|
...
|
...
|
...
|
...
Unassigned
...
Unassigned
|
...
|
...
|
...
|
...
Unassigned
...
Unassigned
|
...
|
...
|
...
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...
Unassigned
...
Unassigned
|
...
|
...
|
...
|
...
Unassigned
...
Unassigned
|
...
|
...
|
...
|
...
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...
Unassigned
|
...
|
...
|
...
|
...
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...
Unassigned
|
...
|
...
|
...
|
...
|
...
Unassigned
|
...
|
...
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...
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...
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...
Unassigned
|
...
|
...
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...
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...
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...
Unassigned
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...
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...
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...
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...
Unassigned
...
Unassigned
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...
|
...
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...
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...
Unassigned
...
Unassigned
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...
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...
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...
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...
Unassigned
...
Unassigned
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...
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...
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...
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...
Unassigned
...
Unassigned
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...
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...
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...
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...
Unassigned
...
Unassigned
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...
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...
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...
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...
Unassigned
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Unassigned
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...
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...
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...
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...
Unassigned
...
Unassigned
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...
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...
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...
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...
Unassigned
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Unassigned
|
...
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...
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...
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...
Unassigned
|
...
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...
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6
|
...
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...
Unassigned
...
Unassigned
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...
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...
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...
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...
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Unassigned
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...
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...
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...
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...
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Unassigned
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...
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...
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Unassigned
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...
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...
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...
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Unassigned
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...
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...
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6
|
...
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...
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Unassigned
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...
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...
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...
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...
Unassigned
...
Unassigned
...
Unassigned
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...
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...
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...
Unassigned
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Unassigned
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Unassigned
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...
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...
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...
Unassigned
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Unassigned
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Unassigned
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...
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...
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Unassigned
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Unassigned
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Unassigned
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...
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Unassigned
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Unassigned
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Unassigned
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...
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Unassigned
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Unassigned
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Unassigned
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...
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...
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Unassigned
...
Unassigned
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Unassigned
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...
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Unassigned
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Unassigned
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Unassigned
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...
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Unassigned
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Unassigned
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Unassigned
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Unassigned
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Unassigned
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Unassigned
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Unassigned
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Unassigned
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Unassigned
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Unassigned
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Unassigned
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Unassigned
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Unassigned
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Unassigned
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Unassigned
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...
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...
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...
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Unassigned
|
...
Reported issues:
9/14/12 - Aytek reports CT of BP4351 is very limited. Does not cover the mass completely and it is non-contrast so I will not fill the form out for that case.
...
9/21/12 - Chris reports Case TCGA BP 4799 contains a chest CT that cannot be evaluated. (MR was scored)
Training Cases - Updated
...
1/
...
7/
...
13
Case | oakin | sprasad | rvikram | mheller | aoto | hvargas | ckarlo | vkatabathina | vsurabhi |
KI-01-0001 | Completed (E) | Completed | Unassigned | Completed (E) | Completed (E) | Completed (E) | Completed (E) In Progress (E) | Completed | Completed (E) |
KI-01-0002 | Completed (E) | Unassigned | Completed (E) | Completed (E) | Unassigned | Unassigned | Completed (E) | Unassigned | Completed (E) |
KI-01-0003 | Unassigned | Unassigned | Completed (E) | Completed (E) | Unassigned | Unassigned | Completed (E) | Unassigned | Completed (E) |
KI-01-0004 | Unassigned | Unassigned | Unassigned | Completed (E) | Unassigned | Unassigned | Completed (E) | Unassigned | Unassigned |
KI-02-0001 | Unassigned | Completed | Unassigned | Completed (E) | Completed (E) | Completed (E) | Completed (E) In Progress (E) | Completed | Unassigned |
KI-02-0002 | Unassigned | Unassigned | Unassigned | Completed (E) | Unassigned | Unassigned | Completed (E) | Unassigned | Unassigned |
KI-02-0003 | Unassigned | Unassigned | Unassigned | Completed (E) | Unassigned | Unassigned | Completed (E) | Unassigned | Unassigned |
KI-02-0004 | Unassigned | Unassigned | Unassigned | Completed (E) | Unassigned | Unassigned | Completed (E) | Unassigned | Unassigned |
ClearCanvas sign-on
Name | User name | Role In Clinical Trial | Number within role in clinical trial |
Oguz Akin | oakin | Performing | 1 |
Srinivasa Prasad | sprasad | Performing | 2 |
Raghu Vikram | rvikram | Performing | 3 |
Matthew Heller | mheller | Performing | 4 |
Aytekin Oto | aoto | Performing | 5 |
Hebert Vargas | hvargas | Performing | 6 |
Christoph Karlo | ckarlo | Performing | 7 |
Venkata Katabathina | vkatabathina | Performing | 8 |
Venkateswar Surabhi | vsurabhi | Performing | 9 |
Alessandro Furlan | afurlan | Performing | 10 |
Nisha Sainani | nsainani | Performing | 11 |
Atul Shinagare | ashinagare | Performing | 12 |
Tarak Bathala | tbathala | Performing | 13 |