Localtab |
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active | true |
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title | Data Access |
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| Data AccessNote to curators! This macro is for collections that are restricted due to facial reconstruction possibility. Note to curators! This macro is for collections that are restricted because of a PI's embargo request General restricted license access |
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Note to curators! Only use the appropriate macro for your collection above, or the text below in the case of NCTN trials. It will need to be tailored with the correct NCT#. This is a limited access data set. To request access please register an account on the NCTN Data Archive. After logging in, use the "Request Data" link in the left side menu. Follow the on screen instructions, and enter NCT00352534 when asked which trial you want to request. In step 2 of the Create Request form, be sure to select “Imaging Data Requested”. Please contact NCINCTNDataArchive@mail.nih.gov for any questions about access requests.Data Type | Download all or Query/Filter | License |
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SAROS Segmentations (NIfTI, 140 MB) | Images, Segmentations, and Radiation Therapy Structures/Doses/Plans (DICOM, XX.X GB) << latter two items only if DICOM SEG/RTSTRUCT/RTDOSE/PLAN exist >> | | Tcia button generator |
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Tcia button generator |
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| (Download requires NBIA Data Retrieverurl | https://wiki.cancerimagingarchive.net/download/attachments/157287899/SAROS%20Collection%20NIfTI%20files%20-%209-12-2023.zip?api=v2 |
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| (Download requires Aspera plugin) | Nctn_with_collab license only |
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Nctn_no_collab license only |
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| Tissue Slide Images (SVS, XX.X GBSegmentation Information Spreadsheet (CSV,176 KB) |
Tcia button generator |
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Tcia button generator |
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| (Download requires Aspera plugin) | Nctn_with_collab license only |
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Nctn_no_collab license only |
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| Clinical data (CSV) | url | https://wiki.cancerimagingarchive.net/download/attachments/157287899/Segmentation%20Info_09-29-2023.csv?api=v2 |
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| tcia-button-generator |
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| Nctn_with_collab license only |
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Nctn_no_collab license only |
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Click the Versions tab for more info about data releases. Additional Resources Additional Resources for this DatasetNote to curators! Use this any time you are linking to NCI's IDC/GDC/PDC resources. The links below are examples and will need to be tailored to point to the specific dataset (see parameters in URLS). Nci_crdc additional resources |
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Note to curators! The link below is an example for NCTN trials and will need to be tailored to the proper URL for the corresponding data on the NCTN Data Archive. Nctn additional resources |
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Note to curators! Below are examples for what to do with other external resources/links that don't fit into the above categories. The following external resources have been made available by the data submitters. These are not hosted or supported by TCIA, but may be useful to researchers utilizing this collection. - Software / Code on Github
- Genomics data in DbGAP
- Genomics data in Gene Expression Omnibus
Collections Used in this Third Party AnalysisBelow is a list of the Collections used in these analyses:. Type SearchACRIN-FLT-Breast (32), Source Images (DICOM, 29.7 GB) ACRIN-HNSCC-FDG-PET/CT (48), Anti-PD-1_MELANOMA (2), HNSCC (17), Head-Neck Cetuximab (12), QIN-HEADNECK (94), TCGA-HNSC (1) |
Tcia button generator |
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url | https://wiki.cancerimagingarchive.net/download/attachments/157287899/SAROS_SourceImages_TCIARestricted_9-12-2023.tcia?api=v2 |
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(Download requires NBIA Data Retriever) | | Source Images (DICOM, 66.9 GB) ACRIN-FLT-Breast (32), ACRIN-NSCLC-FDG-PET (129), Anti-PD-1_Lung (12), | Anti-PD-1_MELANOMA (2), ), COVID-19-NY-SBU (1 HNSCC (17), Head-Neck Cetuximab (12), ), Lung-PET-CT-Dx (17), NSCLC-Radiomics (56), NSCLC-Radiomics-Genomics (20), QIN-HEADNECK (94), TCGA-HNSC (1 TCGA-UCEC (1) |
Tcia button generator |
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url | https://wiki.cancerimagingarchive.net/download/attachments/157287899/SAROS_SourceImages_CCby30_9-12-2023.tcia?api=v2 |
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(Download requires NBIA Data Retriever) | | restrictedlicense(note to curator: check the original collection for its DICOM license) TCGA-UCEC , (note to curator: check the original collection for its DICOM license)Source Images (DICOM, 1.40 GB) COVID-19-NY-SBU (1), Lung-PET-CT-Dx (17) |
Tcia button generator |
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url | https://wiki.cancerimagingarchive.net/download/attachments/157287899/SAROS_SourceImages_CCby40_9-12-2023.tcia?api=v2 |
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(Download requires NBIA Data Retriever) | |
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Localtab |
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title | Detailed Description |
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| Detailed DescriptionImage Statistics | Radiology Image StatisticsPathology Image Statistics |
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ModalitiesModalities | CT | Number of Patients | 882 | Number of Studies | 894 | Number of Series | 900 | Number of Images | 1800 | Images Size (GBMB) |
<< Add any additional information that didn't fit or belong in the Summary section. >>
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Localtab |
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title | Citations & Data Usage Policy |
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| Citations & Data Usage Policy Tcia limited license policy |
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Info |
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| DOI goes here. Create using Datacite with information from Collection Approval form |
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title | Publication Citation |
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| We ask on the proposal form if they have ONE traditional publication they'd like users to cite. |
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| Required acknowledgements only (ex:The CPTAC program requests that publications using data from this program...). If they just want to thank someone, that goes in the Acknowledgement section underneath the Summary.Koitka, S., Baldini, G., Kroll, L., van Landeghem, N., Haubold, J., Sung Kim, M., Kleesiek, J., Nensa, F., & Hosch, R. (2023). SAROS - A large, heterogeneous, and sparsely annotated segmentation dataset on CT imaging data (SAROS) (Version 1) [Data set]. The Cancer Imaging Archive. https://doi.org/10.25737/SZ96-ZG60 |
Info |
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| Clark, K., Vendt, B., Smith, K., Freymann, J., Kirby, J., Koppel, P., Moore, S., Phillips, S., Maffitt, D., Pringle, M., Tarbox, L., & Prior, F. (2013). The Cancer Imaging Archive (TCIA): Maintaining and Operating a Public Information Repository. In Journal of Digital Imaging (Vol. 26, Issue 6, pp. 1045–1057). Springer Science and Business Media LLC.https://doi.org/10.1007/s10278-013-9622-7 |
Other Publications Using This DataTCIA maintains a list of publications which leverage TCIA data. If you have a manuscript you'd like to add please contact the TCIA Helpdesk. |
Localtab |
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| Version X 1 (Current): Updated yyyy2023/mm09/dd28Data Type | Download all or Query/Filter | License |
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Images, Segmentations, and Radiation Therapy Structures/Doses/Plans (DICOM, XX.X GB) << latter two items only if DICOM SEG/RTSTRUCT/RTDOSE/PLAN exist >> | SAROS Segmentations (NIfTI, 140 MB) | |
Tcia button generator |
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| (Download requires the NBIA Data RetrieverTissue Slide Images (SVS, XX.X GBurl | https://wiki.cancerimagingarchive.net/download/attachments/157287899/SAROS%20Collection%20NIfTI%20files%20-%209-12-2023.zip?api=v2 |
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| (Download requires Aspera plugin) | |
Nctn_with_collab license only |
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Nctn_no_collab license only |
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Segmentation Information Spreadsheet (CSV, 176 KB) | |
Tcia button generator |
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| Nctn_with_collab license only |
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Nctn_no_collab license only |
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| Clinical data (CSV) | Tcia button generator |
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Nctn_with_collab license only |
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Nctn_no_collab license only |
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| << One or two sentences about what you changed since last version. No note required for version 1. >> url | https://wiki.cancerimagingarchive.net/download/attachments/157287899/Segmentation%20Info_09-29-2023.csv?api=v2 |
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