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Summary

Redirect
delay5
locationhttps://www.cancerimagingarchive.net/collection/qin-sarcoma/

Excerpt

This collection of soft-tissue sarcoma dynamic contrast-enhanced (DCE) MRI data contains images from a longitudinal study to assess soft-tissue sarcoma response to preoperative chemoradiation treatment. Images were acquired at three time points: prior to the start of treatment (Visit 1, V1), after the first cycle of chemotherapy (Visit 2, V2), and after ~ 8 more weeks of chemoradiation (prior to surgery) (Visit 3, V3).  Not every patient was able to complete all three MRI studies. The value of this collection is to provide clinical imaging data for the development and validation of quantitative imaging methods for assessment of soft-tissue sarcoma response to preoperative treatment.  Initial findings of this study have been published and the data is provided by Oregon Health & Science University, PI Dr. Wei Huang.

The MRI data consist of DCE-MRI images only, which were acquired using a Siemens 3T TIM Trio system with the body coil as the transmitter and a body matrix phased array (combined with a spine matrix phased array) coil as the receiver. Following scout and axial T2-weighted MRI, a RF-spoiled gradient-echo sequence was used to acquire sagittal DCE-MRI images covering the entire tumor, with 100 flip angle, TE/TR = 1.5/6.0 ms, 24-26 cm field of view (FOV), and 5 mm slice thickness with 1 mm gap. A parallel imaging acceleration factor of 2 was used for DCE-MRI, resulting in 7-16 s temporal resolutions depending on tumor size. The total DCE acquisition time was approximately 10 min with gadolinium contrast agent (Prohance®) IV injection (0.1 mmol/kg at 2 mL/s) carried out following acquisition of five baseline image volumes,  followed by a 20-mL saline flush.       

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Localtab Group


Localtab
activetrue
titleData Access

Data Access

When you have a TCIA account, please email to help@cancerimagingarchive.net to request access to these data.

Data TypeDownload all or Query/FilterLicense
Images (DICOM, 10.29GB)


Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/18514816/QIN-SARCOMA_2014-09-04.tcia?version=1&modificationDate=1542733779568&api=v2



Tcia button generator
labelSearch
urlhttps://www.cancerimagingarchive.net/nbia-search/?CollectionCriteria=QIN-SARCOMA



(Download requires the NBIA Data Retriever)

TCIA Restricted



Localtab
titleDetailed Description

Detailed Description

Collection Statistics

Radiology Imaging Statistics

Modalities

MR

Number of Patients

15

Number of Studies

38

Number of Series

2,168

Number of Images

46,614

Image Size (GB)10.29



Localtab
titleCitations & Data Usage Policy

Citations & Data Usage Policy 

Tcia limited license policy

Info
titleData Citation

Huang, W., Ryan, C., Beckett, B., Tudorica, A., Mansoor, A., Afzal, A., Holtorf, M., & Aston, T. (2016). QIN-SARCOMA [Data set]. The Cancer Imaging Archive. https://doi.org/10.7937/K9/TCIA.2016.fXL9sESs


Info
titleAcknowledgement

Please be sure to include the following citations in your work

...

and acknowledge the award that supported collection and sharing of these data sets (U01 CA154602, PI: Wei Huang) if you use this data set.


Info
titlePublication Citation

Meyer

JM

, J. M., Perlewitz

KS

, K. S., Hayden

JB

, J. B., Doung

YC

, Y.-C., Hung

AY

, A. Y., Vetto

JT

, J. T., Pommier

RF

, R. F., Mansoor, A., Beckett

BR

, B. R., Tudorica, A., Mori, M., Holtorf

ML

, M. L., Afzal, A., Woodward

WJ

, W. J., Rodler

ET

, E. T., Jones

RL

, R. L., Huang, W.,

Ryan CW. 

& Ryan, C. W. (2013). Phase I

trial

Trial of

preoperative chemoradiation

Preoperative Chemoradiation plus Sorafenib for

high risk extremity soft tissue sarcoma with dynamic contrast-enhanced magnetic resonance imaging correlates.  Clin Cancer Res 2013 Dec;19(24):6902-6911. PubMed PMID: 2413292; PubMed Central PMCID: PMC3869565 (link)

Data Access

Imaging Data

Icon

This is a limited access data set. To request access, please contact help@cancerimagingarchive.net. Once access is granted, you can view and download these images on The Cancer Imaging Archive (TCIA) by logging in and selecting the QIN-Sarcoma collection.

High-Risk Extremity Soft Tissue Sarcomas with Dynamic Contrast-Enhanced MRI Correlates. In Clinical Cancer Research (Vol. 19, Issue 24, pp. 6902–6911). American Association for Cancer Research (AACR). https://doi.org/10.1158/1078-0432.ccr-13-1594 PMCID: PMC3869565


Info
titleTCIA Citation

Clark, K., Vendt, B., Smith, K., Freymann, J., Kirby, J., Koppel, P., Moore, S., Phillips, S., Maffitt, D., Pringle, M., Tarbox, L., & Prior, F. (2013). The Cancer Imaging Archive (TCIA): Maintaining and Operating a Public Information Repository. In Journal of Digital Imaging (Vol. 26, Issue 6, pp. 1045–1057). Springer Science and Business Media LLC. https://doi.org/10.1007/s10278-013-9622-7 PMCID: PMC3824915

Other Publications Using This Data

TCIA maintainsa list of publications which leverage our data. If you have a publication you'd like to add, please contact TCIA's Helpdesk.


Localtab
titleVersions

Version 1 (Current):

...

Collection Statistics

Updated 2014/09/04

...

Modalities

...

MR

...

Number of Patients

...

15

...

Number of Studies

...

38

...

Number of Series

...

2,168

...

Number of Images

...

46,614

...

Data TypeDownload all or Query/Filter
Images (DICOM, 10.29GB)


Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/18514816/QIN-SARCOMA_2014-09-04.tcia?version=1&modificationDate=1542733779568&api=v2



Tcia button generator
labelSearch
urlhttps://www.cancerimagingarchive.net/nbia-search/?CollectionCriteria=QIN-SARCOMA



(Download requires the NBIA Data Retriever.)

If you are unsure how to download this collection, please view Searching by Collection or refer to our TCIA's User's Guide for more detailed instructions on using the site.

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