Summary
Image Added
Redirect |
---|
delay | 5 |
---|
location | https://www.cancerimagingarchive.net/collection/mimm_sbilab/ |
---|
|
Excerpt |
---|
Microscopic images were captured from bone marrow aspirate slides of patients diagnosed with multiple myeloma as per the standard guidelines. Slides were stained using Jenner- Giemsa stain. Images were captured at 1000x |
...
magnification using Nikon Eclipse-200 microscope equipped with a digital camera. Images were captured in raw BMP format with a size of 2560x1920 pixels. In all, this dataset consists of 85 images. All these 85 images were stain normalized using our in-house methodology before being used for segmentation. These stain normalized images have been provided as the annotated dataset with plasma cells marked in all image slides contained in a |
...
presentation for the ready reference of readers. |
Additional Notes
...
This collection has also been uploaded to the Harvard Blood Cancer Dataverse website. Please refer to DOI 10.7910/DVN/XCX7ST for more information.
Additional Publications using this dataset:
- Ritu Gupta, Pramit Mallick, Rahul Duggal, Anubha Gupta, and Ojaswa Sharma, "Stain Color Normalization and Segmentation of Plasma Cells in Microscopic Images as a Prelude to Development of Computer Assisted Automated Disease Diagnostic Tool in Multiple Myeloma," 16th International Myeloma Workshop (IMW), India, March 2017 https://doi.org/10.1016/j.clml.2017.03.178
Localtab Group |
---|
Localtab |
---|
active | true |
---|
title | Data Access |
---|
| Data Access |
|
...
Data Type | Download all or Query/Filter | License |
---|
Slide Images (BMP |
|
|
...
...
Please note that Box has a 15GB download limit, so you will need to download images in batches.
|
Tcia button generator |
---|
url | https://faspex.cancerimagingarchive.net/aspera/faspex?context=eyJyZXNvdXJjZSI6InBhY2thZ2VzIiwidHlwZSI6ImV4dGVybmFsX2Rvd25sb2FkX3BhY2thZ2UiLCJpZCI6IjUyOCIsInBhc3Njb2RlIjoiNzYxYjNhOWFjNDgyOWM0NDQ0NTFhYTU2NjVlM2Y1NjUwYjM5NDRkMCIsInBhY2thZ2VfaWQiOiI1MjgiLCJlbWFpbCI6ImhlbHBAY2FuY2VyaW1hZ2luZ2FyY2hpdmUubmV0In0= |
---|
|
|
Tcia button generator |
---|
label | Search |
---|
url | https://pathdb.cancerimagingarchive.net/imagesearch?f[0]=collection:mimm_sbilab |
---|
|
|
(Download and apply the IBM-Aspera-Connect plugin to your browser to retrieve this faspex package) | | Annotated plasma cell images (PDF, 12.67 MB) |
Tcia button generator |
---|
url | https://wiki.cancerimagingarchive.net/download/attachments/52756988/Annotated_PPT_MM_Data.pdf?version=1&modificationDate=1615575877898&api=v2 |
---|
|
|
| |
|
|
...
Localtab |
---|
title | Detailed Description |
---|
| Detailed Description
| |
---|
Modalities | Pathology | Number of | |
|
...
Participants | 5 | Number of Studies | 5 | Number of Images | 85 | Images Size (GB) | 1.27 |
|
Localtab |
---|
title | Citations & Data Usage Policy |
---|
| Citations & Data Usage Policy |
|
Add any special restrictions in here.
...
Tcia limited license policy |
---|
|
|
...
...
Info |
---|
title | Publication Citation |
---|
|
|
|
...
...
A., Duggal, R., Gehlot, S., Gupta, R., Mangal, A., Kumar, L., Thakkar, N., & Satpathy, D. (2020). GCTI-SN: Geometry- |
|
|
...
Info |
---|
title | Publication Citation |
---|
| Gupta, A., Mallick, P., Sharma, O., Gupta, R., & Duggal, R. (2018). PCSeg: Color model driven probabilistic multiphase level set based tool for plasma cell segmentation in multiple myeloma. PLOS ONE, 13(12), e0207908. https://doi.org/10.1371/journal.pone.0207908 |
|
|
...
Info |
---|
| Clark, K., Vendt, B., Smith, K., Freymann, J., Kirby, J., Koppel, P., Moore, S., Phillips, S., Maffitt, D., Pringle, M., Tarbox, L., & Prior, F. |
|
|
...
(2013). The Cancer Imaging Archive (TCIA): Maintaining and Operating a Public Information Repository |
|
|
...
. Journal of Digital Imaging, |
|
|
...
...
...
Other Publications Using This DataTCIA maintains a list of publications which leverage TCIA data. If you have a manuscript you'd like to add please contact |
|
...
Localtab |
---|
| Version 1 (Current): Updated 2019/03/25
Data Type | Download all or Query/Filter |
---|
Images (BMP, | |
|
...
...
Tcia button generator |
---|
url | https://faspex.cancerimagingarchive.net/aspera/faspex?context=eyJyZXNvdXJjZSI6InBhY2thZ2VzIiwidHlwZSI6ImV4dGVybmFsX2Rvd25sb2FkX3BhY2thZ2UiLCJpZCI6IjUyOCIsInBhc3Njb2RlIjoiNzYxYjNhOWFjNDgyOWM0NDQ0NTFhYTU2NjVlM2Y1NjUwYjM5NDRkMCIsInBhY2thZ2VfaWQiOiI1MjgiLCJlbWFpbCI6ImhlbHBAY2FuY2VyaW1hZ2luZ2FyY2hpdmUubmV0In0= |
---|
|
|
Tcia button generator |
---|
label | Search |
---|
url | https://pathdb.cancerimagingarchive.net/imagesearch?f[0]=collection:mimm_sbilab |
---|
|
|
(Download and apply the IBM-Aspera-Connect plugin to your browser to retrieve this faspex package) | Annotated plasma cell images (PDF) | Tcia button generator |
---|
url | https://wiki.cancerimagingarchive.net/download/attachments/52756988/Annotated_PPT_MM_Data.pdf?version=1&modificationDate=1615575877898&api=v2 |
---|
|
|
|
|
|