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  • Serial Non-contrast Non-gated T2w MRI Datasets of Patient-derived Xenograft Cancer Models for Development of Tissue Characterization Algorithms (PDMR-Texture-Analysis)

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Localtab
activetrue
titleData Access

Data Access

Data TypeDownload all or Query/FilterLicense

Images (DICOM, 11.8 GB)



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Standard Operating Procedure 50101: MRI T2 Weighted Non-Contrast Protocol Single Mouse Pulmonary Gated and Multi-Mouse Non-Gated


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urlhttps://wiki.cancerimagingarchive.net/download/attachments/145752799/SOP50101_MRI%20T2%20Weighted%20Non-Contrast%20Protocol_Single%20Mouse%20Pulmonary%20Gated%20and%20Multi-Mouse%20Non-Gated.pdf?api=v2



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Standard Operating Procedure 50101: Tumor_Implantation_PDX


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urlhttps://wiki.cancerimagingarchive.net/download/attachments/145752799/SOP50101_Tumor_Implantation_PDX.pdf?api=v2



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PDX Model Characterizations


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urlhttps://wiki.cancerimagingarchive.net/download/attachments/145752799/PDMR-LINKS%2020230607.docx?api=v2



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Data related to specific models in the collection at NCI Patient-Derived Models Repository (PDMR)


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urlhttps://wiki.cancerimagingarchive.net/download/attachments/145752799/PDMR-LINKS%2020230607.docx?api=v2



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Click the Versions tab for more info about data releases.

Additional Resources for this Dataset

Links for each model in the NCI Patient-Derived Models Repository (PDMR)

The National Cancer Institute (NCI) has developed a national repository of Patient-Derived Models (PDMs) comprised of patient-derived xenografts (PDXs), in vitro patient-derived tumor cell cultures (PDCs) and cancer associated fibroblasts (CAFs) as well as patient-derived organoids (PDOrg). These models serve as a resource for public-private partnerships and for academic drug discovery efforts. These PDMs are clinically-annotated with molecular information and made available in the Patient-Derived Model Repository. 

  • SOP50101_Tumor_Implantation_PDX
  • SOP50101_MRI T2 Weighted Non-Contrast Protocol_Single Mouse Pulmonary Gated and Multi-Mouse Non-Gated
  • PDX Model Characterizations used to review images, imaging sessions/dates and models
  •   


    The NCI Cancer Research Data Commons (CRDC) provides access to additional data and a cloud-based data science infrastructure that connects data sets with analytics tools to allow users to share, integrate, analyze, and visualize cancer research data.


    Localtab
    titleDetailed Description

    Detailed Description

    Image Statistics

    Radiology Image Statistics

    Modalities

    MR, SR

    Number of Patients

    175

    Number of Studies

    689

    Number of Series

    1203

    Number of Images

    19343

    Images Size (GB)11.8

    In addition to images, this collection includes Raw Data Storage SOP Class instances with MR Modality, generated by a Philips MR scanner; this data is not useful to anyone without the proprietary software to interpret it.


    Localtab
    titleCitations & Data Usage Policy

    Citations & Data Usage Policy

    Tcia limited license policy

    Info
    titleData Citation

    DOI goes here. Create using Datacite with information from Collection Approval form


    Info
    titleTCIA Citation

    Clark, K., Vendt, B., Smith, K., Freymann, J., Kirby, J., Koppel, P., Moore, S., Phillips, S., Maffitt, D., Pringle, M., Tarbox, L., & Prior, F. (2013). The Cancer Imaging Archive (TCIA): Maintaining and Operating a Public Information Repository. In Journal of Digital Imaging (Vol. 26, Issue 6, pp. 1045–1057). Springer Science and Business Media LLC.https://doi.org/10.1007/s10278-013-9622-7

    Other Publications Using This Data

    TCIA maintains a list of publications which leverage TCIA data. If you have a manuscript you'd like to add please contact the TCIA Helpdesk.

    • Kalen, J. D., Clunie, D. A., Liu, Y., Tatum, J. L., Jacobs, P. M., Kirby, J., Freymann, J. B., Wagner, U., Smith, K. E., Suloway, C., & Doroshow, J. H. (2021). Design and Implementation of the Pre-Clinical DICOM Standard in Multi-Cohort Murine Studies. Tomography (Ann Arbor, Mich.), 7(1), 1–9. https://doi.org/10.3390/tomography7010001


    Localtab
    titleVersions

    Version X (Current): Updated 2023/mm/dd

    Data TypeDownload all or Query/FilterLicense

    Images (DICOM, 11.8 GB)



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    labelSearch


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