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  • Multi-center breast DCE-MRI data and segmentations from patients in the I-SPY 1/ACRIN 6657 trials (ISPY1)

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Comment: edited curated set descriptions. Added level 3 set.

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Level2aDataSet
Level2aDataSet
Level 2a: Good SER Volume Dataset – updated 9/3/14

Level 2a consists of 708 MR studies (208 subjects) in the UCSF image database which, following quality review in 2014, were judged to have sufficiently good image quality and protocol compliance for volumetric DCE SER analysis. Rejection criteria included: incomplete volumetric DCE acquisitions, lack of a 2nd post-contrast acquisition, variability in fat suppression across the image, observed patient motion during the DCE acquisition

7 studies in Level 2a that do NOT have LD measures:

ID 1059, T4
ID 1079, T2 *
ID 1104, T4

ID 1192, T2
ID 1212, T4

ID 1215, T1
ID 1238, T2

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Level2bDataSet
Level2bDataSet
Level 2b: SER Volume Dataset submitted to ACRIN in 2008

This data set is not provided as a shared list, as it is not recommended for use in any analysis. It is described here because it is the data set from which the Level 3 (primary aim analysis) set was derived.

Level 2b consists of 707 MR studies (207 subjects) in the UCSF image database
Differences which were submitted to ACRIN at the close of the trial in 2008. Inclusion and exclusion was determined by quality and protocol reviews available at that time. In addition to the exclusion criteria listed for Level 2a, studies done with imaging in the axial plane, in violation of the sagittal orientation specified in the trial imaging protocol, were excluded due to processing limitations of the analysis software. Similarly, bi-lateral sagittal acquisitions (alternating left and right volumetric acquisitions) were excluded.

Specific inclusion/exclusion differences between Levels 2a and 2b:

15 exams studies accepted for SER analysis since 2008 (in Level 2a but not in 2b)

ID 1005, T3
ID 1043, T2
ID 1046, T4
ID 1057, T3
ID 1074, T3
ID 1084, T1

ID 1110, T4
ID 1139, T4
ID 1159, T4
ID 1176, T2
ID 1201, T2

ID 1203, T4
ID 1206, T4
ID 1225, T3
ID 1219, T3
ID 1228, T4

14 exams studies rejected since 2008 (in Level 2b but not in 2a)

ID 1035, T4 *
ID 1045, T1
ID 1047, T1 *
ID 1053, T2 *
ID 1053, T4 *

ID 1055, T1 *
ID 1086, T1 *
ID 1091, T1 *
ID 1095, T2 *
ID 1173, T3 *

ID 1206, T1
ID 1206, T2
+2 exams for ineligible patient:
ACRIN ID 128 (no I-SPY ID)

* Subjects that were included in the primary aim analysis (Level 3)

Level 3: Subset of Level 2b used in primary aim analysis

586 MR studies (162 subjects) in UCSF image database

45 subjects excluded from Level 2b set

ID 1027

ID 1040

ID 1045

ID 1046

ID 1048

ID 1054

ID 1063

ID 1067

ID 1079

ID 1084

ID 1103

ID 1110

ID 1120

ID 1137

ID 1139

ID 1152

ID 1157

ID 1159

ID 1160

ID 1167

ID 1171

ID 1176

ID 1177

ID 1180

ID 1182

ID 1185

ID 1187

ID 1189

ID 1192

ID 1194

ID 1203

ID 1206

ID 1210

ID 1212

ID 1214

ID 1215

ID 1219

ID 1221

ID 1222

ID 1228

ID 1234

ID 1235

ID 1237

ID 1238

 

ineligible:

Case  #: 128

Data Dictionary

A data dictionary is provided. The dictionary includes descriptions of all private DICOM attributes used in the derived maps and segmentations generated by the volumetric analysis and QC evaluations. Also included are descriptions of ancillary data provided, including demographic, clinical and survival data.

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