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  • Mapping of Edema and Cellular Invasion to MR Phenotypes

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The following shared lists have been created to easily obtain the subset of The Cancer Genome Archive (TCGA)-GBM relevant to this study:

  • Radiogenomic Mapping of Edema/Cellular Invasion MRI-Phenotypes: Consists of only the 78 subjects which were reviewed for their publication. From these cases, the PLoS ONE article indicates two sequences from each case were used for the study: 1) Fluid-Attenuated Inversion Recovery (FLAIR) for segmentation of the edema and 2) post-contrast T1-weighted imaging (T1WI) for segmentation of enhancement (defined as tumor) and necrosis.

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The corresponding clinical and genetic data for the study patients can be obtained from the TCGA Data Portal. The 3D segmentations were created in the slicer and may be made available upon request.  Please contact us for more information:  cancerimagingarchive@mailhelp@cancerimagingarchive.nihnet.gov.