Summary
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| location | https://www.cancerimagingarchive.net/collection/mimm_sbilab/ |
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Microscopic images were captured from bone marrow aspirate slides of patients diagnosed with multiple myeloma as per the standard guidelines. Slides were stained using Jenner- Giemsa stain. Images were captured at 1000x |
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magnification using Nikon Eclipse-200 microscope equipped with a digital camera. Images were captured in raw BMP format with a size of 2560x1920 pixels. In all, this dataset consists of 85 images. All these 85 images were stain normalized using our in-house methodology before being used for segmentation. These stain normalized images have been provided as the annotated dataset with plasma cells marked in all image slides contained in a |
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presentation for the ready reference of readers. |
Additional Notes
This collection has also been uploaded to the Harvard Blood Cancer Dataverse website. Please refer to DOI 10.7910/DVN/XCX7ST for more information.
Additional Publications using this dataset:
- Ritu Gupta, Pramit Mallick, Rahul Duggal, Anubha Gupta, and Ojaswa Sharma, "Stain Color Normalization and Segmentation of Plasma Cells in Microscopic Images as a Prelude to Development of Computer Assisted Automated Disease Diagnostic Tool in Multiple Myeloma," 16th International Myeloma Workshop (IMW), India, March 2017 https://doi.org/10.1016/j.clml.2017.03.178
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| active | true |
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| title | Data Access |
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| Data Access |
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| Data Type | Download all or Query/Filter | License |
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| url | https://faspex.cancerimagingarchive.net/aspera/faspex?context=eyJyZXNvdXJjZSI6InBhY2thZ2VzIiwidHlwZSI6ImV4dGVybmFsX2Rvd25sb2FkX3BhY2thZ2UiLCJpZCI6IjUyOCIsInBhc3Njb2RlIjoiNzYxYjNhOWFjNDgyOWM0NDQ0NTFhYTU2NjVlM2Y1NjUwYjM5NDRkMCIsInBhY2thZ2VfaWQiOiI1MjgiLCJlbWFpbCI6ImhlbHBAY2FuY2VyaW1hZ2luZ2FyY2hpdmUubmV0In0= |
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| label | Search |
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| url | https://pathdb.cancerimagingarchive.net/imagesearch?f[0]=collection:mimm_sbilab |
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(Download and apply the IBM-Aspera-Connect plugin to your browser to retrieve this faspex package) | | | Annotated plasma cell images (PDF, 12.67 MB) |
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| url | https://wiki.cancerimagingarchive.net/download/attachments/52756988/Annotated_PPT_MM_Data.pdf?version=1&modificationDate=1615575877898&api=v2 |
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| title | Detailed Description |
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| Detailed Description
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Modalities | Pathology | Number of | |
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Participants | 5 | Number of Studies | 5 | Number of Images | 85 | | Images Size (GB) | 1.27 |
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| title | Citations & Data Usage Policy |
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| Citations & Data Usage Policy |
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Add any special restrictions in here.
These collections are freely available to browse, download, and use for commercial, scientific and educational purposes as outlined in the Creative Commons Attribution 3.0 Unported License. Questions may be directed to help@cancerimagingarchive.net. Please be sure to acknowledge both this data set and TCIA in publications by including the following citations in your work:
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| title | Publication Citation |
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A., Duggal, R., Gehlot, S., Gupta, R., Mangal, A., Kumar, L., Thakkar, N., & Satpathy, D. (2020). GCTI-SN: Geometry- |
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| title | Publication Citation |
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| Gupta, A., Mallick, P., Sharma, O., Gupta, R., & Duggal, R. (2018). PCSeg: Color model driven probabilistic multiphase level set based tool for plasma cell segmentation in multiple myeloma. PLOS ONE, 13(12), e0207908. https://doi.org/10.1371/journal.pone.0207908 |
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| Info |
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| Clark, K., Vendt, B., Smith, K., Freymann, J., Kirby, J., Koppel, P., Moore, S., Phillips, S., Maffitt, D., Pringle, M., Tarbox, L., & Prior, F. (2013). |
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The Cancer Imaging Archive (TCIA): Maintaining and Operating a Public Information Repository |
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. Journal of Digital Imaging, |
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Other Publications Using This DataTCIA maintains a list of publications which leverage TCIA data. If you have a manuscript you'd like to add please contact |
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| Version 1 (Current): Updated 2019/03/25
| Data Type | Download all or Query/Filter |
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| url | https://faspex.cancerimagingarchive.net/aspera/faspex?context=eyJyZXNvdXJjZSI6InBhY2thZ2VzIiwidHlwZSI6ImV4dGVybmFsX2Rvd25sb2FkX3BhY2thZ2UiLCJpZCI6IjUyOCIsInBhc3Njb2RlIjoiNzYxYjNhOWFjNDgyOWM0NDQ0NTFhYTU2NjVlM2Y1NjUwYjM5NDRkMCIsInBhY2thZ2VfaWQiOiI1MjgiLCJlbWFpbCI6ImhlbHBAY2FuY2VyaW1hZ2luZ2FyY2hpdmUubmV0In0= |
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| label | Search |
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| url | https://pathdb.cancerimagingarchive.net/imagesearch?f[0]=collection:mimm_sbilab |
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(Download and apply the IBM-Aspera-Connect plugin to your browser to retrieve this faspex package) | | Annotated plasma cell images (PDF) | | Tcia button generator |
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| url | https://wiki.cancerimagingarchive.net/download/attachments/52756988/Annotated_PPT_MM_Data.pdf?version=1&modificationDate=1615575877898&api=v2 |
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