Child pages
  • Imaging characterization of a metastatic patient derived model of adenocarcinoma pancreas: (PDMR-292921-168-R)

Versions Compared

Key

  • This line was added.
  • This line was removed.
  • Formatting was changed.

Summary


Redirect
delay5
locationhttps://www.cancerimagingarchive.net/collection/pdmr-292921-168-r/
Excerpt

Pre-clinical animal models of spontaneous metastatic cancer are infrequent; the few that exist are exist are resource intensive because determination of the presence of metastatic disease,  metastatic metastatic burden, and response to therapy normally require multiple timed cohorts with animal sacrifice and extensive pathological extensive pathological examination. We identified and characterized a patient derived xenograft model xenograft model with metastatic potential, adenocarcinoma pancreas xenograft 292921-168-R. In this study we performed a detailed imaging detailed imaging characterization (workflow below) of this model, which develops spontaneous lung metastases, details are provided in the attached standard operating procedures. Tumors in half of the mice were resected in the range 200-300 cmmm3 size; tumors in the other half were allowed to grow until it was necessary to euthanize them because of tumor size.


Image Added


Image Removed

The imaging characteristics of this model (PDMR-292921-168-R), which is available from the National Cancer Institute Patient-Derived Models Repository (https://pdmr.cancer.gov/), is highly favorable for preclinical research studies of metastatic disease when used in conjunction with non-contrast T2 weighted MRI.

Results: Adenocarcinoma pancreas (PDMR-292921-168-R)


Table 1: Penetrance and location of pathological confirmed metastatic lesion(s).

# animals in Group

# animals that displayed metastasis in MRI and confirmed by Pathology

Pathology confirmation of MRI (primary imaging site)

Other confirmed Location (s)

Mouse ID: MRI with pathology confirmation of metastasis

10 (non-resected)

4   

(5 mice were EU due to xenograft size prior to observation of metastases)

Lung

Lung

1409, 1410, 1418, 1423

10 (resected)

10

Lung

Lung, Kidney, Nodes, Peritoneal Wall

1405, 1407, 1408, 1411, 1413,1415, 1416, 1419, 1420, 1422




Percent penetrance with respect to the average time-to-metastasis for non-resected (plot A: time from implant) and resected (plot B: time from tumor resection) cohorts.


Image Added

Plot A

...

Image Added

...

Plot B


PET/CT Characterization of the primary tumor:  Baseline PET (SOP

...

available below) were performed when tumor reached an approximate 200

...

mm3.   Average SUVmax values (n=5) were calculated; [

...

18F]FDG: 1.3 ± 0.2 and [

...

18F]FLT: 2.3 ± 0.6.

Conclusion

...

Excellent metastatic model with at least 50% penetrance un-resected and 100% with planned early resection.  Metastases are well observed on T2 MRI imaging allowing non-invasive evaluation in treatment trials.

Acknowledgements

We would like to acknowledge the individuals and institutions that have provided data for this collection:

  • Frederick National Laboratory for Cancer Research – Special Thanks to Joseph D. Kalen, PhD, Lilia V. Ileva, MS, Lisa A Riffle, Nimit Patel, Keita Saito, PhD, Yvonne Evrard, PhD, Elijah Edmondson, DVM, PhD, Jessica Phillips, Simone Difilippantonio, PhD, Chelsea Sanders, Amy JanesJames, Lia Thang, Ulrike Wagner, Yanling Liu, PhD, John B. Freymann, and Justin Kirby.

  • Division of Cancer Therapeutics and Diagnosis/National Cancer Institute - James L. Tatum, MD, Paula M Jacobs, PhD, Melinda G. Hollingshead, DVM, and James H. Doroshow, MD

  • PixelMed Publishing – Special Thanks to David A. Clunie, MD

  • University of Arkansas for Medical Sciences – Special Thanks to Kirk E. Smith

  • This project has been funded in whole or in part with Federal funds from the National Cancer Institute, National Institutes of Health, under Contract No. Number HHSN261201500003I. The content of this publication does not necessarily reflect the views or policies of the Department of Health and Human Services, nor does mention of trade names, commercial products, or organizations imply endorsement by the U.S. Government.

 SOP50101
Localtab Group



Localtab
activetrue
titleData Access

Data Access

Click the Download button to save a ".tcia" manifest file to your computer, which you must open with the NBIA Data Retriever. Click the Search button to open our Data Portal, where you can browse the data collection and/or download a subset of its contents.


Data TypeDownload all or Query/FilterLicense
Images (DICOM, 1.6 GB)


Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/61080585/PDMR-292921-168-R.tcia?version=1&modificationDate=1584982370329&api=v2



Tcia button generator
labelSearch
urlhttps://nbia.cancerimagingarchive.net/nbia-search/?MinNumberOfStudiesCriteria=1&CollectionCriteria=PDMR-292921-168-R


  

(Download requires the NBIA Data Retriever)

Tcia cc by 4

Standard Operating Procedure 50101

PDMR Patient Specimen (external)

: MRI T2 Weighted Non-Contrast Protocol:

 Single

Single Mouse Pulmonary Gated and Multi-Mouse Non-Gated (pdf, 150 kB)


Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/61080585/SOP50101_MRI%20T2%20Weighted%20Non-Contrast%20Protocol_Single%20Mouse%20Pulmonary%20Gated%20and%20Multi-Mouse%20Non-Gated
Image Removed
.pdf?version=1&modificationDate=1586272585730&api=v2



Tcia cc by 4

Standard Operating Procedure 50102: Positron Emission Tomography (PET) imaging protocol (pdf, 141 kB)


Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/61080585/SOP50102_Positron%20Emission%20Tomography%20%28PET%29%20imaging%20protocol.pdf?version=1&modificationDate=1588105011573&api=v2



Tcia cc by 4

Click the Versions tab for more info about data releases.

Pdmr additional resources

The NCI Cancer Research Data Commons (CRDC) provides access to additional data and a cloud-based data science infrastructure that connects data sets with analytics tools to allow users to share, integrate, analyze, and visualize cancer research data.




Localtab
titleDetailed Description

Detailed Description


Image Statistics


Modalities

MR, SR

Number of Subjects

20

Number of Studies

89

Number of Series

160

Number of Images

2657

Images Size (GB)1.6 GB


In addition to images, this collection includes Raw Data Storage SOP Class instances with MR Modality, generated by a Philips MR scanner; this data is not useful to anyone without the proprietary software to interpret it.




Localtab
titleCitations & Data Usage Policy

Citations & Data Usage Policy

Add any special restrictions in here.

These collections are freely available to browse, download, and use for commercial, scientific and educational purposes as outlined in the Creative Commons Attribution 3.0 Unported License. Questions may be directed to help@cancerimagingarchive.net. Please be sure to acknowledge both this data set and TCIA in publications by including the following citations in your work:

Tcia limited license policy

Info
titleData Citation

Tatum, J., Kalen, J., Ileva, lilia, L, R., S, K., N, P., Jacobs, P., Sanders, C., A, J., Difilippantonio, S., L, T., hollingshead, melinda, J, P., Y, E., Clunie, D., Y, L., Suloway, C., Smith, K., U, W., … Doroshow, J. (n.d.). Imaging characterization of a metastatic patient derived model of adenocarcinoma pancreas: (PDMR-292921-168-R). The Cancer Imaging Archive. https://doi.org/10.7937/TCIA.2020.PCAK-8Z10


Info
titleAcknowledgement

This project has been funded in whole or in part with Federal funds from the National Cancer Institute, National Institutes of Health, under Contract No. HHSN261201500003I. The content of this publication does not necessarily reflect the views or policies of the Department of Health and Human Services, nor does mention of trade names, commercial products, or organizations imply endorsement by the U.S. Government.

Info
titleTCIA Citation

Clark K, Vendt B, Smith K, Freymann J, Kirby J, Koppel P, Moore S, Phillips S, Maffitt D, Pringle M, Tarbox L, Prior F. The Cancer Imaging Archive (TCIA): Maintaining and Operating a Public Information Repository, Journal of Digital Imaging, Volume 26, Number 6, December, 2013, pp 1045-1057. DOI: 10.1007/s10278-013-9622-7


Other Publications Using This Data

TCIA maintains a list of publications which leverage TCIA data. If you have a manuscript you'd like to add please contact the TCIA Helpdesk.




 
Localtab
titleVersions

Version 1 (Current): Updated 2020/03/23


PDMR Patient Specimen (external)
Data TypeDownload all or Query/Filter
Images (DICOM, 1.6 GB)


Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/61080585/PDMR-292921-168-R.tcia?version=1&modificationDate=1584982370329&api=v2



Tcia button generator
labelSearch
urlhttps://nbia.cancerimagingarchive.net/nbia-search/?MinNumberOfStudiesCriteria=1&CollectionCriteria=PDMR-292921-168-R


  

(Download requires the NBIA Data Retriever)

SOP50101: MRI T2 Weighted Non-Contrast Protocol: Single Mouse Pulmonary Gated and Multi-Mouse Non-Gated

Image Removed


Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/61080585/SOP50101_MRI%20T2%20Weighted%20Non-Contrast%20Protocol_Single%20Mouse%20Pulmonary%20Gated%20and%20Multi-Mouse%20Non-Gated.pdf?version=1&modificationDate=1586272585730&api=v2



Pdmr additional resources