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Localtab Group


Localtab
activetrue
titleData Access

Data Access

Data TypeDownload all or Query/Filter

Images (DICOM, 19.0 GB)

Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/70226443/COVID-19-AR-July132020_NBIA-manifest.tcia?version=1&modificationDate=1594658316635&api=v2
Tcia button generator
labelSearch
urlhttps://nbia.cancerimagingarchive.net/nbia-search/?MinNumberOfStudiesCriteria=1&CollectionCriteria=COVID-19-AR

(Download requires the NBIA Data Retriever)

Clinical data (CSV)

Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/70226443/COVID-19%20AR%20Clinical%20Correlates%20July202020.xlsx?version=1&modificationDate=1594659431356&api=v2

Viral Genomes Genbank repository (web)

Tcia button generator
labelSearch
urlhttps://www.ncbi.nlm.nih.gov/nuccore/MT766907
 accession no. MT766907: USA/AR-UAMS001/2020

Tcia button generator
labelSearch
urlhttps://www.ncbi.nlm.nih.gov/nuccore/MT766908
 accession no. MT766908: USA/AR-UAMS002/2020

Click the Versions tab for more info about data releases.

Please contact help@cancerimagingarchive.net  with any questions regarding usage.


Localtab
titleDetailed Description

Detailed Description

Image Statistics


Modalities

CT, CR, DX

Number of Patients

105

Number of Studies

256

Number of Series

461

Number of Images

31,935

Images Size (GB)19.0



Localtab
titleCitations & Data Usage Policy

Citations & Data Usage Policy

Tcia license 4 international

Info
titleData Citation

Desai, S., Baghal, A., Wongsurawat, T., Al-Shukri, S., Gates, K., Farmer, P., Rutherford, M., Blake, G.D., Nolan, T., Powell, T., Sexton, K., Bennett, W., Prior, F. (2020). Data from Chest Imaging with Clinical and Genomic Correlates Representing a Rural COVID-19 Positive Population [Data set]. The Cancer Imaging Archive. DOI: https://doi.org/10.7937/tcia.2020.py71-5978.


Info
titlePublication Citation

Desai, S., Baghal, A., Wongsurawat, T., Jenjaroenpun, P., Powell, T., Al-Shukri, S., Gates, K., Farmer, P., Rutherford, M., Blake, G., Nolan, T., Sexton, K., Bennett, W., Smith, K., Syed, S., Prior, F. (2020). Chest imaging representing a COVID-19 positive rural U.S. population. Scientific Data. 2020;7(1):414. doi: https://doi.org/10.1038/s41597-020-00741-6.


Info
titlePublication Citation

Jenjaroenpun, P., Wanchai, V., Ono-MooreOnoMoore, K.D., Laudadio, J., James, L.P., Adams, S.H.,   Prior, F., Nookaew, I., Ussery, D.W., Wongsurawat, T. (2020). Complete Genome Sequences of Two SARS-CoV-2 from Arkansas, USA, Obtained Using Nanopore Sequencing, genome sequences of isolates from rural U.S. patients harboring the D614G mutation, obtained using Nanopore sequencing. Microbiology Resource Announcements, 2020; in press accepted.DOI: 10.1128/MRA.01109-20


Info
titleAcknowledgement

This project has been funded in whole or in part with federal funds from the National Center for Advancing Translational Sciences  UL1 TR003107 and  the National Cancer Institute, Contract No. 75N91019D00024, Subcontract 20X023F. 


Info
titleTCIA Citation

Clark K, Vendt B, Smith K, Freymann J, Kirby J, Koppel P, Moore S, Phillips S, Maffitt D, Pringle M, Tarbox L, Prior F. The Cancer Imaging Archive (TCIA): Maintaining and Operating a Public Information Repository, Journal of Digital Imaging, Volume 26, Number 6, December, 2013, pp 1045-1057. DOI: 10.1007/s10278-013-9622-7

Other Publications Using This Data

TCIA maintains a list of publications which leverage TCIA data. If you have a manuscript you'd like to add please contact the TCIA Helpdesk.


Localtab
titleVersions

Version 1 (Current): Updated 2020/07/13

Data TypeDownload all or Query/Filter

Images (DICOM, 19.0 GB)

Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/70226443/COVID-19-AR-July132020_NBIA-manifest.tcia?version=1&modificationDate=1594658316635&api=v2
Tcia button generator
labelSearch
urlhttps://nbia.cancerimagingarchive.net/nbia-search/?MinNumberOfStudiesCriteria=1&CollectionCriteria=COVID-19-AR

(Requires NBIA Data Retriever.)

Clinical Data (CSV)

Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/70226443/COVID-19%20AR%20Clinical%20Correlates%20July202020.xlsx?version=1&modificationDate=1594659431356&api=v2

 Viral Genomes Genbank repository (web)

Tcia button generator
labelSearch
urlhttps://www.ncbi.nlm.nih.gov/nuccore/MT766907
 accession no. MT766907: USA/AR-UAMS001/2020

Tcia button generator
labelSearch
urlhttps://www.ncbi.nlm.nih.gov/nuccore/MT766908
 accession no. MT766908: USA/AR-UAMS002/2020



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