The Cancer Imaging Archive (TCIA) Public Access

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  • High-dimensional imaging of colorectal carcinoma and other tumors with 50+ markers (CRC_FFPE-CODEX_CellNeighs)

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Localtab Group


Localtab
activetrue
titleData Access

Data Access

Data TypeDownload all or Query/FilterLicense
Tissue Slide Images (TIFF, 2.0TB)


Tcia button generator
urlhttps://faspex.cancerimagingarchive.net/aspera/faspex/external_deliveries/18?passcode=2442106c1a03f1b911073d97f323130a67aa5d54



(Download and apply the IBM-Aspera-Connect plugin to your browser to retrieve this faspex package) 

Tcia cc by 4

Clinical data (XLS)


Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/70227790/Multi-tumor_TMA_composition.xlsx?version=1&modificationDate=1596640676197&api=v2

Multi-tumor_TMA_composition.xlsx



Tcia cc by 4

Clinical data (XLS)


Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/70227790/CRC_TMAs_patient_annotations.xlsx?version=1&modificationDate=1596640684172&api=v2



Tcia cc by 4

Clinical data (XLS)

Click the Versions tab for more info about data releases.

Please contact help@cancerimagingarchive.net  with any questions regarding usage.


Localtab
titleDetailed Description

Detailed Description

Image Statistics


Modalities

Pathology

Number of Subjects

35

Number of Images

200

Images Size (TB)2.0

High-dimensional CODEX images (hyperstacks of immunofluorescence images)


Localtab
titleCitations & Data Usage Policy

Citations & Data Usage Policy

Tcia limited license policy

Info
titleData Citation

Schürch, C. M., Bhate, S., Barlow, G., Phillips, D., Noti, L., Zlobec, I., Chu, P., Black, S., Demeter, J., McIlwain, D., Samusik, N., Goltsev, Y., & Nolan, G. (2020). High-dimensional imaging of colorectal carcinoma and other tumors with 50+ markers [Data set]. The Cancer Imaging Archive. https://doi.org/10.7937/TCIA.2020.FQN0-0326


Info
titlePublication Citation

Schürch et al., Coordinated Cellular Neighborhoods Orchestrate Antitumoral Immunity at the Colorectal Cancer Invasive Front, Cell (2020), https://doi.org/10.1016/j.cell.2020.07.005


Info
titleTCIA Citation

Clark K, Vendt B, Smith K, Freymann J, Kirby J, Koppel P, Moore S, Phillips S, Maffitt D, Pringle M, Tarbox L, Prior F. The Cancer Imaging Archive (TCIA): Maintaining and Operating a Public Information Repository, Journal of Digital Imaging, Volume 26, Number 6, December, 2013, pp 1045-1057. DOI: 10.1007/s10278-013-9622-7

Other Publications Using This Data

TCIA maintains a list of publications which leverage TCIA data. If you have a manuscript you'd like to add please contact the TCIA Helpdesk.


Localtab
titleVersions

Version 1 (Current): Updated 2020/08/05

Data TypeDownload all or Query/Filter
Images (TIFF, 2.0TB)


Tcia button generator
urlhttps://faspex.cancerimagingarchive.net/aspera/faspex/external_deliveries/18?passcode=2442106c1a03f1b911073d97f323130a67aa5d54



Clinical Data (XLS, DOC))

Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/70227790/Multi-tumor_TMA_composition.xlsx?version=1&modificationDate=1596640676197&api=v2


Clinical Data (XLS)


Tcia button generator
urlhttps://wiki.cancerimagingarchive.net/download/attachments/70227790/CRC_TMAs_patient_annotations.xlsx?version=1&modificationDate=1596640684172&api=v2