PROSTATE-MRI

Summary

This collection of prostate Magnetic Resonance Images (MRIs) was obtained with an endorectal and phased array surface coil at 3T (Philips Achieva). Each patient had biopsy confirmation of cancer and underwent a robotic-assisted radical prostatectomy. A mold was generated from each MRI, and the prostatectomy specimen was first placed in the mold, then cut in the same plane as the MRI. The data was generated at the National Cancer Institute, Bethesda, Maryland, USA between 2008-2010. For scientific or other inquiries relating to this data set, please contact the TCIA Helpdesk.

Data Access

Data Type	Download all or Query/Filter	License
Images (DICOM, 3.2GB)	(Download requires the NBIA Data Retriever)	CC BY 3.0
Pathology Images (JPEG, 206MB)	(Download and apply the IBM-Aspera-Connect plugin to your browser to retrieve this faspex package)	CC BY 3.0

Click the Versions tab for more info about data releases.

Additional Resources for this Dataset

The NCI Cancer Research Data Commons (CRDC) provides access to additional data and a cloud-based data science infrastructure that connects data sets with analytics tools to allow users to share, integrate, analyze, and visualize cancer research data.

Imaging Data Commons (IDC) (Imaging Data)

Detailed Description

Collection Statistics
Modalities	MR (with some PET/CT)
Number of Participants	26
Number of Studies	26
Number of Series	182
Number of Images	22,036
Image Size (GB)	3.2

Note from the investigators: The DICOM elements for these values may no longer exist within the files themselves but: the b values are 0, 188, 375, 563, 750 for the diffusion weighted MRI of that dataset.

Citations & Data Usage Policy

Users must abide by the TCIA Data Usage Policy and Restrictions. Attribution should include references to the following citations:

Data Citation

Choyke P, Turkbey B, Pinto P, Merino M, Wood B. (2016). Data From PROSTATE-MRI. The Cancer Imaging Archive. http://doi.org/10.7937/K9/TCIA.2016.6046GUDv

TCIA Citation

Clark K, Vendt B, Smith K, Freymann J, Kirby J, Koppel P, Moore S, Phillips S, Maffitt D, Pringle M, Tarbox L, Prior F. The Cancer Imaging Archive (TCIA): Maintaining and Operating a Public Information Repository, Journal of Digital Imaging, Volume 26, Number 6, December, 2013, pp 1045-1057. (paper)

Other Publications Using This Data

TCIA maintains a list of publications that leverage our data. If you have a publication you'd like to add, please contact the TCIA Helpdesk.

Mayer, R., Simone II, C. B., Turkbey, B., & Choyke, P. (2021). Correlation of prostate tumor eccentricity and Gleason scoring from prostatectomy and multi-parametric-magnetic resonance imaging. In Quantitative Imaging in Medicine and Surgery (Vol. 11, Issue 10, pp. 4235–4244). AME Publishing Company. https://doi.org/10.21037/qims-21-24
Mayer, R., Simone II, C. B., Turkbey, B., & Choyke, P. (2021). Algorithms applied to spatially registered multi-parametric MRI for prostate tumor volume measurement. In Quantitative Imaging in Medicine and Surgery (Vol. 11, Issue 1, pp. 119–132). AME Publishing Company. https://doi.org/10.21037/qims-20-137a
Mayer, R., Simone, C. B., II, Skinner, W., Turkbey, B., & Choykey, P. (2018). Pilot study for supervised target detection applied to spatially registered multiparametric MRI in order to non-invasively score prostate cancer. In Computers in Biology and Medicine (Vol. 94, pp. 65–73). Elsevier BV. https://doi.org/10.1016/j.compbiomed.2018.01.003

Version 1 (Current): Updated 2011/06/30

Data Type	Download all or Query/Filter
Images (DICOM, 3.2GB)	(Download requires the NBIA Data Retriever)
Pathology Images (JPEG)	(Download and apply the IBM-Aspera-Connect plugin to your browser to retrieve this faspex package)

Update May 2018: The download of these data is no longer Limited to users with specific permission from the PIs of the Collection.

Space shortcuts

Child pages