SummaryThis collection comprises 25 patients with Manufacturer CT at Veteran's Hospital before treatment and 2 follow up T1-weighted and FLAIR MRI along with accompanying digitized histopathology (H&E stained) images of corresponding biopsy specimens. Each slide was digitized at 10x magnification using an Aperio slide scanner resulting in a set of .svs images. Annotations of cancer presence on the pseudo-whole mount sections were made by an expert pathologist. Segmentation was performed with by Software (github, below) and compared to expert radiologist segmentation. co-registered the corresponding radiologic and histopathologic tissue sections to map disease extent onto the corresponding MRI scans. Co-clinical data that led to this therapy in humans is available within TCIA (here) as ThisOther Collection. For more information about the original aims of this trial please see: http://meeting.conference.org/abstract/35849.
DICOM Data was provided by Patna Madhavi, Sapna Patel, Anne Tsao.
Principal Investigator, PhD, University of City and Co-Investigator, MD, City Veteran's Hospital. This work was supported by NIH Grant (link). Pathology segmentations were performed by Helpful Expert, MD.
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Data Access (Radiology)
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|Image Size (GB)||4.4|
The data set is fully described in the following publications:
Citations & Data Usage Policy
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Please be sure to include the following citations in your work if you use this data set:
Madabhushi, A., & Feldman, M. (2016).Anti-PD-1 Melanoma Dataset. The Cancer Imaging Archive.http://doi.org/
Clark K, Vendt B, Smith K, Freymann J, Kirby J, Koppel P, Moore S, Phillips S, Maffitt D, Pringle M, Tarbox L, Prior F. The Cancer Imaging Archive (TCIA): Maintaining and Operating a Public Information Repository, Journal of Digital Imaging, Volume 26, Number 6, December, 2013, pp 1045-1057. (paper)
Other Publications Using This Data
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Version 1 (Current) Updated 06-30-2018
|Data Type||Download all or Query/Filter|
|Images (DICOM, 4.4 GB)|