- Created by Geri Blake on May 31, 2019
You are viewing an old version of this page. View the current version.
Compare with Current View Page History
Version 1 Next »
Summary
This collection contains images from 137 head and neck cancer patients. For these patients pre-treatment CT (some including co-registered PET) scans and manual delineation by a radiation oncologist of the 3D volume of the gross tumor volume. Clinical outcome data are available for 135 of these subjects. This dataset refers to the Head and Neck1 dataset of the study published in Nature Communications (http://doi.org/10.1038/ncomms5006). In short, this publication applies a radiomic approach to computed tomography data of 1,019 patients with either lung or head-and-neck cancer. Radiomics refers to the comprehensive quantication of tumour phenotypes by applying a large number of quantitative image features. In present analysis 440 features quantifying tumour image intensity, shape and texture, were extracted. We found that a large number of radiomic features have prognostic power in independent data sets, many of which were not identied as signicant before. Radiogenomics analysis revealed that a prognostic radiomic signature, capturing intra-tumour heterogeneity, was associated with underlying gene-expression patterns. These data suggest that radiomics identies a general prognostic phenotype existing in both lung and head-andneck cancer. This may have a clinical impact as imaging is routinely used in clinical practice, providing an unprecedented opportunity to improve decision-support in cancer treatment at low cost.
This dataset is intended to be open access to support repeatability and reproducibility of research in the radiomics domain. We additionally expect this dataset to be used as a reference set in the search for image-based biomarkers that may be prognostic for overall survival and head-and-neck cancer. This dataset will be the subject of an upcoming Nature Data article addressing OPEN, FACT and FAIR radiomics practices to support transparency, harmonization and collaboration in the study of radiomics.
Acknowledgements
We would like to acknowledge the individuals and institutions that have provided data for this collection:
Leonard Wee, Maastro Clinic, Maastricht, Limburg (Netherlands) and Hugo Aerts, Dana-Farber Cancer Institute/Harvard Medical School, Boston, Mass
Data Access
Click the Download button to save a ".tcia" manifest file to your computer, which you must open with the NBIA Data Retriever. Click the Search button to open our Data Portal, where you can browse the data collection and/or download a subset of its contents.
Data Type | Download all or Query/Filter |
---|---|
Images (DICOM, XX.X GB) |
|
Click the Versions tab for more info about data releases.
Detailed Description
Image Statistics | |
---|---|
Modalities | PT, RT |
Number of Patients | 137 |
Number of Studies | 137 |
Number of Series | 349 |
Number of Images | 28781 |
Images Size (GB) | 28781 |
Add any additional information as needed below. Likely would be something from site.
Citations & Data Usage Policy
Add any special restrictions in here.
These collections are freely available to browse, download, and use for commercial, scientific and educational purposes as outlined in the Creative Commons Attribution 3.0 Unported License. Questions may be directed to help@cancerimagingarchive.net. Please be sure to acknowledge both this data set and TCIA in publications by including the following citations in your work:
Data Citation
Wee L, Aerts H, Kalendralis P, Dekker A. NSCLC-RADIOMICS-INTEROBSERVER1. 2019. DOI: (to be added).
Publication Citation
Aerts HJWL, Velazquez ER, Leijenaar RTH, Parmar C, Grossmann P, Carvalho S, Bussink J, Monshouwer R, Haibe-Kains B, Rietveld D, Hoebers F, Rietbergen MM, Leemans CR, Dekker A, Quackenbush J, Gillies RJ, Lambin P. Decoding Tumour Phenotype by Noninvasive Imaging Using a Quantitative Radiomics Approach, Nature Communications, Volume 5, Article Number 4006, June 03, 2014. DOI: http://doi.org/10.1038/ncomms5006.
TCIA Citation
Clark K, Vendt B, Smith K, Freymann J, Kirby J, Koppel P, Moore S, Phillips S, Maffitt D, Pringle M, Tarbox L, Prior F. The Cancer Imaging Archive (TCIA): Maintaining and Operating a Public Information Repository, Journal of Digital Imaging, Volume 26, Number 6, December, 2013, pp 1045-1057. DOI: 10.1007/s10278-013-9622-7
Other Publications Using This Data
TCIA maintains a list of publications which leverage TCIA data. If you have a manuscript you'd like to add please contact the TCIA Helpdesk.
Version 1 (Current): Updated 2019/05/31
Data Type | Download all or Query/Filter |
---|---|
Images (DICOM, xx.x GB) | (Requires NBIA Data Retriever.) |
Added new subjects.
- No labels