Summary
However, existing publicly available mammography databases are limited by small sample size, lack of diversity in patient populations, missing biopsy confirmations and unknown molecular sub-types. To help fill the gap, we built a database conducted on 1,775 patients from China with benign or malignant breast disease who underwent mammography examination between July 2012 and January 2016. The database consists of 3,728 mammographies from these 1,775 patients, with biopsy confirmed type of benign or malignant tumors. For 749 of these patients (1,498 mammographies) we also include patients' molecular subtypes. Image data were acquired on a GE Senographe DS mammography system.
Acknowledgements
- The authors of this dataset thank the volunteers from the School of Computer Science and Engineering, South China University of Technology for assisting to tidy the clinical and imaging data. This work was supported by the grant from the National Natural Science Foundation of China (no.61771007).
- This work was partially supported by the Key-Area Research and Development of Guangdong Province under Grant (2020B010166002, 2020B1111190001), the National Natural Science Foundation of China (61472145, 61771007), Guangdong Natural Science Foundation (2017A030312008), and the Health & Medical Collaborative Innovation Project of Guangzhou City (201803010021, 202002020049).
- Harmonization of the components of this dataset, including into standard DICOM representation, was supported in part by the NCI Imaging Data Commons consortium. NCI Imaging Data Commons consortium is supported by the contract number 19X037Q from Leidos Biomedical Research under Task Order HHSN26100071 from NCI.
Data Access
Data Type | Download all or Query/Filter | License |
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Images (DICOM, 22.9 GB) | (Download requires the NBIA Data Retriever) | |
Clinical data (XLSX, 70 kB) |
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Additional Resources for this Dataset
The NCI Cancer Research Data Commons (CRDC) provides access to additional data and a cloud-based data science infrastructure that connects data sets with analytics tools to allow users to share, integrate, analyze, and visualize cancer research data.
- Imaging Data Commons (IDC) (Imaging Data)
Please note, it has been discovered that the hashes for the pixels of the following seem to be identical. TCIA does not know which is the "more correct" case for the files mentioned:
- D1-0202 (series UID ending with 31072, 1-1.dcm image) and D2-0284 (seriesUID ending with 98151, 1-1.dcm image)
- D1-0202 (series UID ending with 31072, 1-2.dcm image) and D2-0284 (seriesUID ending with 98151, 1-2.dcm image)
- D1-0202 (series UID ending with 31072, 1-3.dcm image) and D2-0284 (seriesUID ending with 98151, 1-3.dcm image)
- D1-0202 (series UID ending with 31072, 1-4.dcm image) and D2-0284 (seriesUID ending with 98151, 1-4.dcm image)
- D1-0808 (series UID ending with 62447, 1-1.dcm image) and D1-1292 (series UID ending with 65585, 1-1.dcm image)
Detailed Description
Image Statistics | |
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Modalities | MG |
Number of Patients | 1775 |
Number of Studies | 1775 |
Number of Series | 1775 |
Number of Images | 5202 |
Images Size (GB) | 22.9 GB |
- Mammography images were collected in .TIFF format and converted to DICOM.
- Clinical data are saved in .XLSX format. Note that for those rows where there exists BOTH a value for ID1 and ID2, TCIA image database stores ONLY the ID2 value as PatientID.
- For the D2-XXXX dataset, it is a dataset that only involves malignant tumors. Therefore, only one side of the clinical data is reasonable, such a situation shows that the other side is benign. We provided mammograms from both the left and right breast.
Citations & Data Usage Policy
Users must abide by the TCIA Data Usage Policy and Restrictions. Attribution should include references to the following citations:
Data Citation
Cui, Chunyan; Li Li; Cai, Hongmin; Fan, Zhihao; Zhang, Ling; Dan, Tingting; Li, Jiao; Wang, Jinghua. (2021) The Chinese Mammography Database (CMMD): An online mammography database with biopsy confirmed types for machine diagnosis of breast. The Cancer Imaging Archive. DOI: https://doi.org/10.7937/tcia.eqde-4b16
Publication Citation
Cai, H., Huang, Q., Rong, W., Song, Y., Li, J., Wang, J., Chen, J., & Li, L. (2019). Breast Microcalcification Diagnosis Using Deep Convolutional Neural Network from Digital Mammograms. Computational and Mathematical Methods in Medicine, 2019, 1–10. https://doi.org/10.1155/2019/2717454
Publication Citation
Wang, J., Yang, X., Cai, H., Tan, W., Jin, C., & Li, L. (2016). Discrimination of Breast Cancer with Microcalcifications on Mammography by Deep Learning. Scientific Reports, 6(1). https://doi.org/10.1038/srep27327
TCIA Citation
Clark, K., Vendt, B., Smith, K., Freymann, J., Kirby, J., Koppel, P., Moore, S., Phillips, S., Maffitt, D., Pringle, M., Tarbox, L., & Prior, F. (2013). The Cancer Imaging Archive (TCIA): Maintaining and Operating a Public Information Repository. Journal of Digital Imaging, 26(6), 1045–1057. https://doi.org/10.1007/s10278-013-9622-7
Other Publications Using This Data
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Version 1 (Current): Updated 2021/04/06
Data Type | Download all or Query/Filter |
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Images (DICOM, 22.9 GB) | (Download requires the NBIA Data Retriever) |
Clinical data (XLSX) |