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6. The Protocol template is the first AIM Template, and is used for indicating what images were available for review. Check all applicable boxes from the lists and click the "Create Annotation" button in the bottom left corner of the window.
Note: You can right click anywhere on the images to view a list of all available image series.
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8. Fill out the Tumor form (all answers must be filled in). Then right click and select the Ruler tool. Use the Ruler tool to measure the tumor and then click "Create Annotation".
Note: You can confirm that your markup was sent successfully with your form by the appearance of some additional labels on the screen.
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18. Once this is done you will see 3 tabs open in Firefox. The active tab will likely be the 3rd one which required your TCIA credentials. This tab shows you the scores you have already submitted to the server.
Note: The TCGA-KIRC Protocol is the only type of form that should be missing a Size entry. Below you can see the Tumor entry (2nd row) is missing a Size entry. This means that the markup did not get properly recorded. If this occurs to you, please try filling out the form and re-drawing the markup again. Then notify Justin/John to delete the errant score.
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