Summary
These MRIs are pre-operative examinations performed in 159 subjects with Low Grade Gliomas (WHO grade II & III). Segmentation of tumors in three axial slices that include the one with the largest tumor diameter and ones below and above are provided in NiFTI format. Tumor grade and histologic type are also available. All of these subjects have biopsy proven 1p19q results, performed using FISH. For the 1p/19q status "n/n" means neither 1p nor 19q were deleted. "d/d" means 1p and 19q are co-deleted.
Data Access
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| Data Type | Download all or Query/Filter |
|---|---|
| Images (DICOM, 2.7GB) | |
| Segmentations (NiFTI, 2.9GB) |
|
| 1p19q Status and Histologic Type |
|
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Detailed Description
Collection Statistics | Updated 2017/07/31 |
|---|---|
Modalities | MRI, SEG, NIfTI |
Number of Patients | 159 |
Number of Studies | 160 |
Number of Series | 319 |
Number of Images | 17360 |
| Image Size (GB) | 2.7 |
Supporting Documentation and Metadata
For the 1p/19q status "n/n" means neither 1p nor 19q were deleted. "d/d" means 1p and 19q are co-deleted.
Citations & Data Usage Policy
This collection is freely available to browse, download, and use for commercial, scientific and educational purposes as outlined in the Creative Commons Attribution 3.0 Unported License. See TCIA's Data Usage Policies and Restrictions for additional details. Questions may be directed to help@cancerimagingarchive.net.
Please be sure to include the following citations in your work if you use this data set:
Data Citation
Erickson, Bradley; Akkus, Zeynettin; Sedlar, Jiri; Korfiatis, Panagiotis. (2017). Data From LGG-1p19qDeletion. The Cancer Imaging Archive. http://doi.org/10.7937/K9/TCIA.2017.dwehtz9v
TCIA Citation
Clark K, Vendt B, Smith K, Freymann J, Kirby J, Koppel P, Moore S, Phillips S, Maffitt D, Pringle M, Tarbox L, Prior F. The Cancer Imaging Archive (TCIA): Maintaining and Operating a Public Information Repository, Journal of Digital Imaging, Volume 26, Number 6, December, 2013, pp 1045-1057. (paper)
Other Publications Using This Data
- Predicting Deletion of Chromosomal Arms 1p/19q in Low-Grade Gliomas from MR Images Using Machine Intelligence. Zeynettin Akkus, Issa Ali, Jiří Sedlář, Jay P. Agrawal, Ian F. Parney, Caterina Giannini,and Bradley J. Erickson. J Digit Imaging. 2017 Aug; 30(4): 469–476. Published online 2017 Jun 9. doi: 10.1007/s10278-017-9984-3. PMCID: PMC5537096
- https://doi.org/10.1007/s10278-017-9965-6 Bradley J. Erickson, Panagiotis Korfiatis, Zeynettin Akkus, Timothy Kline, Kenneth Philbrick. Toolkits and Libraries for Deep Learning. Journal of Digital Imaging 2017 p1618-1627.
TCIA maintains a list of publications which leverage our data.If you have a publication you'd like to add please contact the TCIA Helpdesk.
Version 1 (Current): Updated 2017/09/30
| Data Type | Download all or Query/Filter |
|---|---|
| Images (2.7GB) |
|
| Segmentations (NiFTi, 2.9GB) |
|
| 1p19q Status and Histologic Type |
|