Summary
This image collection was created as a companion data set to augment the larger REMBRANDT project. It consists of 130 cases of MR multi-sequence images of pre-surgical brain tumor patients including cases of glioblastoma, astrocytomas and oligodendrogliomas from the REMBRANDT patient population.
Metadata
The patients in TCIA can be matched by subject identifier with the extensive clinical, gene and expression data of the same case available from the REMBRANDT Data Portal to research the link between radiological phenotype and tissue genotype. In addition to this there are also imaging feature characterizations provided by neuroradiologists from Thomas Jefferson University Hospital. This feature set has become known as "VASARI" and eventually became the starting point for the TCGA Glioma Phenotype Research Group efforts.
- VASARI_MR_featurekey4.pdf - This document is a "key" for understanding and interpreting the annotation spreadsheet
- VASARI_MRI_features (gmdi - wiki).xls - This document is the actual annotations spreadsheet generated at TJU
For scientific inquiries about the VASARI feature set or corresponding analysis please contact Adam Flanders at adam.flanders@jefferson.edu.
Data Access
Collection Statistics |
|
---|---|
Modalities |
MR |
Number of Patients |
130 |
Number of Studies |
174 |
Number of Series |
1,483 |
Number of Images |
110,020 |
You can view and download these images on the Cancer Imaging Archive by selecting the REMBRANDT collection. If you are unsure how to download this Collection view our quick guide on Searching by Collection or you can refer to our The Cancer Imaging Archive User's Guide for more detailed instructions on using the site.