To enhance the value of TCIA collections we encourage the research community to publish their analyses of existing TCIA image collections. Examples of this kind of data includes radiologist or pathologist annotations, image classifications, segmentations, radiomics features, or derived/reprocessed images. Similar to submitting new image collections, these data are reviewed by the TCIA Advisory Group for relevance and curated using our normal processes to assure data are de-identified. However, TCIA does not certify the quality of the analyses themselves (e.g. accuracy of segmentation on a given scan). Researchers should always carefully review the data and any related publications before deciding whether these analyses could be useful in their work.
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Glioblastoma: Imaging Genomic Mapping Reveals Sex-specific Oncogenic Associations of Cell Death
Glioblastoma multiforme: exploratory radiogenomic analysis by using quantitative image features
NCI-ISBI 2013 Challenge: Automated Segmentation of Prostate Structures
Lung | Chest | 31 | RIDER Lung CT | Tumor segmentations | 2020-02-13 | |
Dataset of Segmented Nuclei in Hematoxylin and Eosin Stained Histopathology Images | Various (14 collections) | Various (14 collections) | Various (14 TCGA collections) | Nuclei segmentations | 2020-02-08 | |
Head and Neck Squamous Cell Carcinoma | Head-Neck | 215 | HNSCC | Radiation Therapy Structures | 2019-07-11 | |
SDTM datasets of clinical data and measurements for selected cancer collections to TCIA | Breast, Glioblastoma | Breast, Brain | 516 | ISPY1, BREAST-DIAGNOSIS, Breast-MRI-NACT-Pilot, TCGA-BRCA, Ivy GAP | Standardized (SDTM format) conversions of clinical and image analysis data | 2019-06-21 |
Crowds Cure Cancer: Data collected at the RSNA 2018 annual meeting | Various (13 collections) | Various (13 collections) | 324 | Various (13 collections) | Lesion measurements | 2019-05-30 |
QIN multi-site collection of Lung CT data with Nodule Segmentations | Lung | Chest | 31 | Lung Phantom, LIDC-IDRI, QIN LUNG CT, RIDER Lung CT | Tumor segmentations | 2018-12-18 |
Tumor-Infiltrating Lymphocytes Maps from TCGA H&E Whole Slide Pathology Images | Various (13 collections) | Various (13 collections) | 4,759 | Various (13 TCGA collections) | Deep learning based computational stain for staining tumor-infiltrating lymphocytes (TILs) | 2018-12-17 |
Breast | Breast | 84 | TCGA-BRCA | Radiologist assessments of image features, lesion segmentations, radiomic features, and multi-gene assays | 2018-09-04 |
Crowds Cure Cancer: Data collected at the RSNA 2017 annual meeting | Lung Adenocarcinoma, Renal Clear Cell, Liver, Ovarian | Chest, Kidney, Liver, Ovary | 352 | TCGA-LUAD, TCGA-KIRC, TCGA-LIHC, TCGA-OV | Lesion measurements | 2018-05-17 |
QIN multi-site collection of Lung CT data with Nodule Segmentations
Lung Adenocarcinoma | Chest | 40 | LungCT-Diagnosis, QIN LUNG CT | Tumor segmentations and radiomic image features | 2017-08-11 | |
Segmentation Labels and Radiomic Features for the Pre-operative Scans of the TCGA-GBM collection | Glioblastoma | Brain | 135 | TCGA-GBM | Tumor segmentations and radiomic image features | 2017-07-17 |
Segmentation Labels and Radiomic Features for the Pre-operative Scans of the TCGA-LGG collection | Low Grade Glioma | Brain | 108 | TCGA-LGG | Tumor segmentations and radiomic image features | 2017-07-17 |
ROI Masks Defining Low-Grade Glioma Tumor Regions In the TCGA-LGG Image Collection | Low Grade Glioma | Brain | 188 | TCGA-LGG | Radiologist assessments of image features, tumor segmentations | 2017-03-17 |
Standardized representation of the TCIA LIDC-IDRI annotations using DICOM
DICOM-SEG Conversions for TCGA-LGG and TCGA-GBM Segmentation Datasets
Colon, Lung, Breast, Glioblastoma | Colon, Chest, Breast, Brain | 40 | CT COLONOGRAPHY, LIDC-IDRI, TCGA-BRCA, TCGA-GBM | N/A | 2016-12-08 | |
Glioblastoma: Imaging Genomic Mapping Reveals Sex-specific Oncogenic Associations of Cell Death | Glioblastoma | Brain | 99 | TCGA-GBM | N/A | 2016-08-02 |
High-Grade Serous Ovarian Cancer | Ovary | 93 | TCGA-OV | Radiologist assessments of image features, genomic subtypes | 2016-08-02 |
Tumor-Infiltrating Lymphocytes Maps from TCGA H&E Whole Slide Pathology Images
Segmentation Labels and Radiomic Features for the Pre-operative Scans of the TCGA-GBM collection
Segmentation Labels and Radiomic Features for the Pre-operative Scans of the TCGA-LGG collection
SDTM datasets of clinical data and measurements for selected cancer collections to TCIA
Crowds Cure Cancer: Data collected at the RSNA 2018 annual meeting
Glioblastoma | Brain | 74 | TCGA-GBM | N/A | 2015-08-20 | |
NCI-ISBI 2013 Challenge: Automated Segmentation of Prostate Structures | Prostate | Prostate | 80 | Prostate structure segmentations | 2015-08-20 | |
Renal Clear Cell Carcinoma | Kidney | 103 | TCGA-KIRC | Radiologist assessments of image features | 2015-05-28 | |
Lung | Chest | 102 | LIDC-IDRI | N/A | 2015-02-24 | |
Glioblastoma | Brain | 75 | TCGA-GBM | Radiologist assessments of image features | 2014-11-12 | |
Breast | Breast | 48 | TCGA-BRCA | N/A | 2014-11-12 | |
Glioblastoma multiforme: exploratory radiogenomic analysis by using quantitative image features | Glioblastoma | Brain | 55 | TCGA-GBM | Tumor segmentations | 2014-11-05 |
Glioblastoma | Brain | 45 | TCGA-GBM | Radiologist assessments of image features and hemodynamic parameters | 2014-07-24 | |
Lung | Chest | 26 | NSCLC Radiogenomics | N/A | 2013-03-01 |